New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 11413040 (0.890)3 (0.070) 3/230 NT 7.7% coding (88/582 nt) PP_0108 hypothetical protein
?NC_002947 = 114151 35 (0.840)coding (109/582 nt) PP_0108 hypothetical protein

CCCTGGCTACCGCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/113977‑114130
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggtggCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCAGTGGCGTGGCGGTGGCCATGGCGTTTCTCCTTGTTTTGATGCCAGCCGAAGTAG  <  NC_002947/114151‑114008
                                                                                                                                                                                                                                                                                                          
CCCTTGCTACCGCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTG                                                                                                                                                      >  2:203111/1‑150
 CCTGGCTACCGCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCTAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGG                                                                                                                                                     <  1:455195/150‑1
                                   TTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAG                                                                                                                   <  2:396606/150‑1
                                             ATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGA                                                                                                                 >  1:1142150/1‑142
                                             ATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGA                                                                                                                 <  2:1142150/142‑1
                                                                                                                                                 TGCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCAGTGGCGTGGCGGTGGCCATGGCGTTTCTCCTTGTTTTGATGCCAGCCGAAG     <  1:841992/150‑1
                                                                                                                                                  GCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCA                                                                  <  1:224620/88‑1
                                                                                                                                                  GCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCA                                                                  >  2:224620/1‑88
                                                                                                                                                    TGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCAGTGGCGTGGCGGTGGCCATGGCGTTTCTCCTTGTTTTGATGCCAGCCGAAGTAG  >  2:916369/1‑150
                                                                                                                                                      GTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCA                                                        <  1:1145800/94‑1
                                                                                                                                                      GTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCA                                                        >  2:1145800/1‑94
                                                                                                                                                                                                                                                                                                          
CCCTGGCTACCGCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/113977‑114130
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggtggCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCAGTGGCGTGGCGGTGGCCATGGCGTTTCTCCTTGTTTTGATGCCAGCCGAAGTAG  <  NC_002947/114151‑114008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.