New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 114130 | 40 (0.890) | 3 (0.070) | 3/230 | NT | 7.7% | coding (88/582 nt) | PP_0108 | hypothetical protein |
? | NC_002947 | = 114151 | 35 (0.840) | coding (109/582 nt) | PP_0108 | hypothetical protein |
CCCTGGCTACCGCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/113977‑114130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggtggCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCAGTGGCGTGGCGGTGGCCATGGCGTTTCTCCTTGTTTTGATGCCAGCCGAAGTAG < NC_002947/114151‑114008 CCCTTGCTACCGCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTG > 2:203111/1‑150 CCTGGCTACCGCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCTAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGG < 1:455195/150‑1 TTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAG < 2:396606/150‑1 ATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGA > 1:1142150/1‑142 ATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGA < 2:1142150/142‑1 TGCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCAGTGGCGTGGCGGTGGCCATGGCGTTTCTCCTTGTTTTGATGCCAGCCGAAG < 1:841992/150‑1 GCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCA < 1:224620/88‑1 GCTGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCA > 2:224620/1‑88 TGGTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCAGTGGCGTGGCGGTGGCCATGGCGTTTCTCCTTGTTTTGATGCCAGCCGAAGTAG > 2:916369/1‑150 GTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCA < 1:1145800/94‑1 GTGGCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCA > 2:1145800/1‑94 CCCTGGCTACCGCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/113977‑114130 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctggtggCCAGAACCATTGGCCCAAGCACCACCAGCAGGATCAGCAAAAGCTGCAAACGCCCACGGGCTCTGGGTTTGCTACGTTCAGGCGCGTCCAGTGGCGTGGCGGTGGCCATGGCGTTTCTCCTTGTTTTGATGCCAGCCGAAGTAG < NC_002947/114151‑114008 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |