New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 114130	40 (0.890)	3 (0.070)	3/230	NT	7.7%	coding (88/582 nt)	PP_0108	hypothetical protein
	?	NC_002947	= 114151	35 (0.840)					coding (109/582 nt)	PP_0108	hypothetical protein

GCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTGCCGATCTCGGCGTGGCGGAGCAGGACGATCGCTGGCAGTTGCTG  >  NC_002947/113988‑114279                                                                                                                                               |                                                                                                                                                      gCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCGAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTgg                                                                                                                                                >  1:978013/1‑150 (MQ=255)   tctGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCATGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGc                                                                                                                                              >  1:289616/1‑150 (MQ=255)    ctGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGCGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGcc                                                                                                                                             <  2:193497/150‑1 (MQ=255)       gTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAAt                                                                                                                                          >  1:894246/1‑150 (MQ=255)           tGCTCTACCTCTACTTCGGCTGACATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGtt                                                                                                                                      <  2:867916/150‑1 (MQ=255)             ctctacctctacTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCt                                                                                                                                    <  1:508436/150‑1 (MQ=255)               ctacctctacTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTgg                                                                                                                                  <  2:894246/150‑1 (MQ=255)                    tctacTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCt                                                                                                                                    >  2:238026/1‑143 (MQ=255)                    tctacTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCt                                                                                                                                    <  1:238026/143‑1 (MQ=255)                     ctACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGccacca                                                                                                                            >  2:916369‑M2/1‑144 (MQ=255)                        cTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTg                                                                                                                                   >  1:172331/1‑140 (MQ=255)                        cTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTg                                                                                                                                   <  2:172331/140‑1 (MQ=255)                        cTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGccaccagca                                                                                                                         <  1:841992‑M2/150‑10 (MQ=255)                         ttCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGccagaaccattggcccaagcaccaccagcag                                                                                                                        <  2:396606‑M1/150‑32 (MQ=255)                             gCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTAc                                                                                                                    <  1:260640/150‑1 (MQ=255)                                   aTCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGccagaaccattggcccaagcaccaccagcagga                                                                                                                      <  2:1142150‑M1/142‑34 (MQ=255)                                   aTCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGccagaaccattggcccaagcaccaccagcagga                                                                                                                      >  1:1142150‑M1/1‑109 (MQ=255)                                   aTCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCtt                                                                                                              >  2:1205331/1‑150 (MQ=255)                                          cAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCt                                                                                                       <  2:102299/150‑1 (MQ=255)                                          cAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATACt                                                                                                       <  1:1205331/150‑1 (MQ=255)                                           aaGGAGAAACTCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTg                                                                                                      <  1:203111/150‑1 (MQ=255)                                             ggAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTggg                                                                                                    >  2:526591/1‑150 (MQ=255)                                                 aaaCGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTAcc                                                                                                >  2:415614/1‑150 (MQ=255)                                                        aTGGCCACCGCCACGCCACTGGACGCGCATGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGc                                                                                         <  2:289616/150‑1 (MQ=255)                                                         tGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAAAGCCCGGGGGCGTTTGAAGCTTTTACTGATCCTGCTGGTGGTGGTTAGGCCAATGGTTCTGGCAACCAGCCAGGACAAGCTTAAATTCTGGGTACCGAAAGGcc                                                                                        >  1:497595/1‑150 (MQ=255)                                                                cgccacgccaCTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTa                                                                                 <  1:229625/150‑1 (MQ=255)                                                                        cacTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACa                                                                                                                   >  1:807364/1‑108 (MQ=255)                                                                        cacTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACa                                                                                                                   <  2:807364/108‑1 (MQ=255)                                                                        cacTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGgcg                                                                         >  1:713835/1‑150 (MQ=255)                                                                           tGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGccac                                                                                                                              >  2:1145800‑M2/1‑90 (MQ=255)                                                                           tGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGccac                                                                                                                              <  1:1145800‑M2/94‑5 (MQ=255)                                                                                gcgcCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTgg                                                                                                     <  1:427000/114‑1 (MQ=255)                                                                                gcgcCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTgg                                                                                                     >  2:427000/1‑114 (MQ=255)                                                                                gcgcCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGAtt                                                                 <  1:526591/150‑1 (MQ=255)                                                                                  gcCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTgg                                                               >  1:762822/1‑150 (MQ=255)                                                                                     tGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGccaccagc                                                                                                                          >  2:224620‑M2/1‑80 (MQ=255)                                                                                     tGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGccaccagc                                                                                                                          <  1:224620‑M2/88‑9 (MQ=255)                                                                                           tAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATg                                                          >  1:289725/1‑146 (MQ=255)                                                                                           tAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATg                                                          <  2:289725/146‑1 (MQ=255)                                                                                             gCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAg                                                                                           <  1:494432/111‑1 (MQ=255)                                                                                             gCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAg                                                                                           >  2:494432/1‑111 (MQ=255)                                                                                               aaaCCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGc                                                  >  2:1094780/1‑150 (MQ=255)                                                                                                   ccAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTg                                              >  2:547352/1‑150 (MQ=255)                                                                                                            gTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTGCCGATCTCg                                     >  2:1097757/1‑150 (MQ=255)                                                                                                                  gTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTGCCGATCTCGGCGTgg                               >  2:1148842/1‑150 (MQ=255)                                                                                                                            tttGCTGATCCTGCTCGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTGCCGATCTCGGCGTGGCGGAGCAGGa                     <  2:841992/150‑1 (MQ=255)                                                                                                                                cTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTGCCGATCTCGGCGTGGCGGAGCAGGACGAt                 >  2:1031143/1‑150 (MQ=255)                                                                                                                                  gATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTGCCGATCTCGGCGTGGCGGAGCAGGACGATCg               >  1:651205/1‑150 (MQ=255)                                                                                                                                    tCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGccaccagcaggatcagcaaaagctgcaaacgcccacgggctctgggtttgctacgttcaggcgcgtccagtggcgtggcggtggccatggcgtttctccttgttttgat                     <  2:1142150‑M2/142‑110 (MQ=255)                                                                                                                                    tCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGccaccagcaggatcagcaaaagctgcaaacgcccacgggctctgggtttgctacgttcaggcgcgtccagtggcgtggcggtggccatggcgtttctccttgttttgat                     >  1:1142150‑M2/1‑33 (MQ=255)                                                                                                                                      ctgctgGTGGTGCTTGGGCCAATGGTTCTGGccaccagcaggatcagcaaaagctgcaaacgcccacgggctctgggtttgctacgttcaggcgcgtccagtggcgtggcggtggccatggcgtttctccttgttttgatgccagccgaa           <  2:396606‑M2/150‑120 (MQ=255)                                                                                                                                       tgctgGTGGccagaaccattggcccaagcaccaccagcaggatcagcaaaagctgcaaacgcccacgggctctgggtttgctacgttcaggcgcgtccagtggcgtggcggtggccatggcgtttctccttgttttgatgccagccgaag          <  1:841992‑M1/150‑142 (MQ=255)                                                                                                                                        gctgGTGGccagaaccattggcccaagcaccaccagcaggatcagcaaaagctgcaaacgcccacgggctctgggtttgctacgttca                                                                       >  2:224620‑M1/1‑8 (MQ=255)                                                                                                                                        gctgGTGGccagaaccattggcccaagcaccaccagcaggatcagcaaaagctgcaaacgcccacgggctctgggtttgctacgttca                                                                       <  1:224620‑M1/88‑81 (MQ=255)                                                                                                                                          tggtggccagaaccattggcccaagcaccaccagcaggatcagcaaaagctgcaaacgcccacgggctctgggtttgctacgttcaggcgcgtccagtggcgtggcggtggccatggcgtttctccttgttttgatgccagccgaagtag       >  2:916369‑M1/1‑6 (MQ=255)                                                                                                                                          tggtggTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTGCCGATCTCGGCGTGGCGGAGCAGGACGATCGCTGGCAGt       >  2:1025127/1‑150 (MQ=255)                                                                                                                                            gtggccagaaccattggcccaagcaccaccagcaggatcagcaaaagctgcaaacgcccacgggctctgggtttgctacgttcaggcgcgtcca                                                             >  2:1145800‑M1/1‑4 (MQ=255)                                                                                                                                            gtggccagaaccattggcccaagcaccaccagcaggatcagcaaaagctgcaaacgcccacgggctctgggtttgctacgttcaggcgcgtcca                                                             <  1:1145800‑M1/94‑91 (MQ=255)                                                                                                                                               gtgCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTGCCGATCTCGGCGTGGCGGAGCAGGACGATCGCTGGCAGTTGCTg  <  2:713835/150‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                      GCTCTGGTTCTGCTCTACCTCTACTTCGGCTGGCATCAAAACAAGGAGAAACGCCATGGCCACCGCCACGCCACTGGACGCGCCTGAACGTAGCAAACCCAGAGCCCGTGGGCGTTTGCAGCTTTTGCTGATCCTGCTGGTGGTGCTTGGGCCAATGGTTCTGGCCACCAGCATGTACAAGCTTAAATTCTGGGTACCGGAAGGCCGCAGCTACCATGGCGCCATGATTGGCAATGGGGAAAGCCGTGCCGATCTCGGCGTGGCGGAGCAGGACGATCGCTGGCAGTTGCTG  >  NC_002947/113988‑114279

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.