| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 205042 = | 13 (0.290) | 10 (0.230) | 4/240 | NT | 44.3% | coding (10548/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 208443 = | NA (NA) | coding (13949/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
CTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/205193‑205042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACACTCGACAAAACCCCGGTCAGCACGTCGGTCACCGAC > NC_002947/208443‑208591 aTTCAAAGGCTGCGGTCGATGTCGTCAGAGGTGCGGTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGT < 2:260052/149‑1CTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGT > 1:121497/1‑150CTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGT > 2:206136/1‑150 TTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTG < 1:951183/150‑1 TTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTG < 2:746981/150‑1 TTCAACGATTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTG < 1:807245/150‑1 TCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTGG < 1:228172/150‑1 ACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTG < 1:411797/125‑1 ACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTG > 2:411797/1‑125 gtaCCCACGGTACCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTGGGTACTGCTACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCG > 1:735412/4‑150 GTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCG > 1:997996/1‑132 GTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTGGGCACTGCCACCGTCACTGCCCCGGACAATGTCTACGTCGGTACCAACGACCCTGTCG < 2:997996/132‑1 CCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTGGTCACTGCAACCGTGACTGCCCCGGACAACGTCTACGTCGGTACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGa > 2:290686/1‑149 CACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCCCAGCGTGAAGGTCAAT‑GCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGT < 1:322302/101‑1 CACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCCCAGCGTGAAGGTCAAT‑GCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGT > 2:322302/1‑101 CGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGGCACCGTGGGCACTGCTACCGTCACTGCCCCGGGTAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAG > 1:198429/1‑150 CGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCACTCAGCGTGAAGGTCAAT‑GCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGA > 1:135552/1‑134 CGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCACTCAGCGTGAAGGTCAAT‑GCACTGTGGGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGA < 2:135552/134‑1 ACGGTTTTGCCGTCGCTCCGCGTGACGGTCAAT‑GCACTGTGGGTAGTGCTACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGACGTCGGCAAGTTCGAGCAAC < 2:735412/150‑1 GGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACACTCGACAAAACCCCGGTCAGCACGTCGGTCACCGAC < 2:1044559/150‑1 CTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTACCGACGTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACGGTGCCGTTGGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAAT‑GCACTGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/205193‑205042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggGCACTGCTACCGTCACTGCCCCGGACAACGTCTACGTCGGCACCAACGACCCTGTCGTGATGTCGATCGCAACCGTTGGAGGTGCGGACGTCGGTAAGTTCGAGCAACTGACACTCGACAAAACCCCGGTCAGCACGTCGGTCACCGAC > NC_002947/208443‑208591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |