New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	309592 =	55 (1.220)	4 (0.090)	4/236	NT	7.0%	coding (244/483 nt)	PP_0255	hypothetical protein
	?	NC_002947	309627 =	54 (1.260)					coding (209/483 nt)	PP_0255	hypothetical protein

GCATTGGGTGGGGTACTGGGCTCTGTCGTGGGCAACTCCATCGGTGGCAGCACCGGCGGCGCCATTGGTGCCGGTCTGGGCGGTGCAGCAGGTGGCGCCCTGGGCGCAGACAAACGCCAGCGTGGTGAGGCCGCTATCGGCGGCGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/309742‑309592 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACAGAGCCCAGTACCCCACCCAATGCGCCGCCAATGCCG  >  NC_002947/309627‑309755                                                                                                                                                                                                                                                                                          GCATTGGGTGGGGTACTGGGCTCTGTCGTGGGCAACTCCATCGGTGGCAGCACCGGCGGCGCCATTGGTGCCGGTCTGGGCGGTGCAGCAGGTGGCGCCCTGGGCGCAGACAAACGCCAGCGTGGTGAGGCCGCTATCGGCGGCGCGCTG                                                                                                                                    >  1:411086/1‑150                                                                                               GCGCCCTGGGCGCAGACAAACGCCAGCGTGGTGAGGCCGCTATCGGCGGCGCGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCACCCGGTAGTGCCACCGATGGAGTTGCCCACGACA                                      >  2:754471/1‑150                                                                                                                  ACGCCAGCGTGGTGAGGCCGCTATCGGCGGCGCGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGC                                              <  1:987529/123‑1                                                                                                                  ACGCCAGCGTGGTGAGGCCGCTATCGGCGGCGCGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGC                                              >  2:987529/1‑123                                                                                                                                   CCGCTATCGGCGGCGCGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCACCGACAGAGCCCAGTACCCCACCCAATGCGCCGCCAATGCCG  <  1:754471/150‑1                                                                                                                                                                                                                                                                                          GCATTGGGTGGGGTACTGGGCTCTGTCGTGGGCAACTCCATCGGTGGCAGCACCGGCGGCGCCATTGGTGCCGGTCTGGGCGGTGCAGCAGGTGGCGCCCTGGGCGCAGACAAACGCCAGCGTGGTGAGGCCGCTATCGGCGGCGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/309742‑309592 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctggCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACAGAGCCCAGTACCCCACCCAATGCGCCGCCAATGCCG  >  NC_002947/309627‑309755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.