New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 309592 = | 55 (1.220) | 4 (0.090) | 4/236 | NT | 7.0% | coding (244/483 nt) | PP_0255 | hypothetical protein |
? | NC_002947 | 309627 = | 54 (1.260) | coding (209/483 nt) | PP_0255 | hypothetical protein |
CGGCCATCGCGGTAATCGTCTTTGTCGGCCTCTTTGCCCAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACAGAGCCCAGTACCCCACCCAAT > NC_002947/309447‑309740 | cggcCATCGCGGTAATCGTCTTTGTCGGCCTCTTTGCCCAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAgc < 1:1183047/150‑1 (MQ=255) tCGCGGTAATCGTCTTTGTCGGCCTCTTTGCCCAGGTAGTTACCCAGCGCACCACCGGGACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGcgccg > 2:411086/1‑150 (MQ=255) gTAATCGTCTTTGTCGGCCTCTTTGCCCAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGcgccgc > 2:251502/1‑146 (MQ=255) gTAATCGTCTTTGTCGGCCGCTTTGCCCAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGcgccgc < 1:251502/146‑1 (MQ=255) cggcattggcggcgcattgggtggggtactgggctctgtcggtggcaactccatcggtggcagcaccggcggcgccattggtgccggtctgggcggtgcagcaggtggcgccctgggcgcagacaaacgCCAGCGCGCCGCCGATAGCgg < 1:754471‑M1/21‑1 (MQ=255) ctctTTGCCCAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTg < 1:416405/150‑1 (MQ=255) tttGCCCAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGcc > 2:1035444/1‑149 (MQ=255) gCCCAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGttt < 1:962/150‑1 (MQ=255) gCCCAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGttt < 1:477674/150‑1 (MQ=255) cccAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTg > 1:603135/1‑150 (MQ=255) ccAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGt > 2:671413/1‑150 (MQ=255) ccAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGt > 2:22478/1‑150 (MQ=255) ccAGGGAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCGCCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGt > 2:269477/1‑150 (MQ=255) cAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTc > 1:851887/1‑150 (MQ=255) gTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCGCCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTgc < 1:269477/150‑1 (MQ=255) cccAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAgg > 1:528091/1‑150 (MQ=255) ccAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAggg > 2:797012/1‑150 (MQ=255) ccAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAggg > 2:1000640/1‑150 (MQ=255) ccAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAcgg > 1:192200/1‑150 (MQ=255) cAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGgc < 2:756315/150‑1 (MQ=255) aGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGgcg > 1:131668/1‑150 (MQ=255) tgtcgtgggcaactccatcggtggcactaccgggtgcgccattggtgccggtctgggcggtgcagcaggtggcgccctgggcgcagacaaacgCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGgcgc > 2:754471‑M1/94‑150 (MQ=255) accaccggcaccaccgCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCAcc > 2:1120750/1‑150 (MQ=255) accaccggcaccaccgCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCAcc > 1:302789/1‑150 (MQ=255) gcaactccatcggtggcagcaccggcggcgccattggtgccggtctgggcggtgcagcaggtggcgccctgggcgcagacaaacgCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGt < 1:987529‑M1/38‑1 (MQ=255) gcaactccatcggtggcagcaccggcggcgccattggtgccggtctgggcggtgcagcaggtggcgccctgggcgcagacaaacgCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGt > 2:987529‑M1/86‑123 (MQ=255) cggcaccaccgCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACctgctg < 2:843502/150‑1 (MQ=255) gcaccgccgCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCa > 1:653417/1‑150 (MQ=255) ccaccgCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCg > 2:884926/1‑150 (MQ=255) caccgCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGgcgc > 2:361754/1‑135 (MQ=255) caccgCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGgcgc < 1:361754/135‑1 (MQ=255) caccgCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGc > 2:71521/1‑150 (MQ=255) ccgccgGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCGGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGccc < 1:324757/150‑1 (MQ=255) gccgGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAg > 2:921779/1‑150 (MQ=255) ccgGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGa < 1:921779/150‑1 (MQ=255) tGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGc < 1:671413/150‑1 (MQ=255) ccGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCAc < 1:648857/150‑1 (MQ=255) ccGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGACTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCAc < 2:1070078/150‑1 (MQ=255) cgcgCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCAcc > 2:667600/1‑150 (MQ=255) gcgcCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCt < 1:642911/97‑1 (MQ=255) gcgcCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCt > 2:642911/1‑97 (MQ=255) aaTGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGgc < 1:1007974/150‑1 (MQ=255) aGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCaa > 1:274354/1‑141 (MQ=255) aGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCaa < 2:274354/141‑1 (MQ=255) tACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCgg > 2:770181/1‑150 (MQ=255) cccGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGtg < 1:1000640/150‑1 (MQ=255) cGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGttt > 1:964902/1‑87 (MQ=255) cGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGttt < 2:964902/87‑1 (MQ=255) cGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGtgct > 2:1201070/1‑150 (MQ=255) cccACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATg < 1:1201070/150‑1 (MQ=255) cccACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATg > 1:30379/1‑150 (MQ=255) aGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGtttc < 2:653417/150‑3 (MQ=255) aGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGc < 1:797012/150‑1 (MQ=255) ccgaccACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACg > 1:340271/1‑150 (MQ=255) cgaccACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGa < 1:884926/150‑1 (MQ=255) accACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTTTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACa > 2:230187/1‑150 (MQ=255) gtgaccaccGGCAGCGCCCAGGCCGCCGCCCATAGCGGCCTCGCCCCCCTGGCGTTTGTCGGCGCCCAGGGCGCCACCCGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACAGTGcc < 2:327244/147‑1 (MQ=255) gTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCa > 1:287620/1‑92 (MQ=255) gTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCa < 2:287620/92‑1 (MQ=255) caccTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACAGAGCCCAGTa > 1:723334/1‑150 (MQ=255) aGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACAGAGCCCAGTACcccacc < 2:528091/150‑1 (MQ=255) gcgcCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACAGAGCCCAGTACcccaccc > 1:70592/1‑150 (MQ=255) cccAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACAGAGCCCAGTACCCCACCCAAt < 1:71521/150‑1 (MQ=255) | CGGCCATCGCGGTAATCGTCTTTGTCGGCCTCTTTGCCCAGGTAGTTACCCAGCGCACCACCGGCACCACCGCCGGCTGCCGCGCCAATGTAGCTACCCGTGGTGCCGCCCACGGAGCGACCGACCACGTTACCACCTGCAGCGCCCAGCGCGCCGCCGATAGCGGCCTCACCACGCTGGCGTTTGTCTGCGCCCAGGGCGCCACCTGCTGCACCGCCCAGACCGGCACCAATGGCGCCGCCGGTGCTGCCACCGATGGAGTTGCCCACGACAGAGCCCAGTACCCCACCCAAT > NC_002947/309447‑309740 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |