| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 401316 | NA (NA) | 7 (0.170) | 7/222 | NT | 16.0% | coding (899/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | = 401372 | 41 (0.910) | coding (955/1059 nt) | PP_0334 | transposase | |||||
TTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑Atgatcgccgcctc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/401168‑401316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCCCA < NC_002947/401372‑401214 TTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑AT > 1:27534/1‑150 TCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATG > 2:726146/1‑150 CGGTATCGTGTCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGA > 1:112188/1‑150 GGTATCGTGTCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGAT < 2:112188/150‑1 GTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATC < 1:125647/150‑1 ATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGACTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCACCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGC < 2:119404/150‑1 TCGTGCCCGATCAGCAAAGCAGCGGAAACAAAATCAGATTGGGTAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCC < 1:116644/150‑1 CCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTC < 1:434132/150‑1 GATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTT > 2:1027609/1‑150 GATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCC < 2:732778/142‑1 GATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCC > 1:732778/1‑142 ACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATC < 2:521638/120‑1 ACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATC > 1:521638/1‑120 AAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCC > 1:117805/1‑150 ATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAG < 1:760700/150‑1 gGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTAATGCTCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGG < 1:259603/149‑1 CAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGC < 1:1027609/150‑1 CGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATTAGCCAGCCTGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGA < 2:117805/150‑1 TCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTG < 1:273391/105‑1 TCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑ATGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTG > 2:273391/1‑105 GATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCAT < 1:297453/150‑1 ATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATC < 2:431351/150‑1 CGCCGCCTCCGTCCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGAGCATCTGGCTGATCGGAATCAGGCGTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTT < 2:81881/150‑1 GCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTG > 2:895378/1‑150 CCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGC < 2:381386/150‑1 CCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGC > 1:1156513/1‑150 CCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGC < 1:106568/150‑1 CCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGC > 2:168895/1‑45 CCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGC < 1:168895/45‑1 CGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCC < 1:420769/150‑1 CCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCCCA > 1:942539/1‑150 TTCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAG‑Atgatcgccgcctc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/401168‑401316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGATCGCCGCCTCCTTGCGCCCAAGGCGGGATAGCCAGCGCAAGAGGCGGCGATCATCTGGCTGATCGGAATCAGGCCTTAGCTGGCTCAAGACGGAATGCGCGCCCTGGATCATCAGGCTGCGTATGTAGCCGTCACCGCGCTTGCTCATCTTGCCCA < NC_002947/401372‑401214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |