New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 401316NA (NA)7 (0.170) 7/222 NT 16.0% coding (899/1059 nt) PP_0334 transposase
?NC_002947 = 401372 41 (0.910)coding (955/1059 nt) PP_0334 transposase

GTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGC  >  NC_002947/401235‑401521
                                                                                                                                         |                                                                                                                                                     
cggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccatataatccgcagatttCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATc                                                                                                                                           >  2:1080035‑M1/71‑150 (MQ=255)
                           tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGt                                                                                                                >  1:132851/1‑150 (MQ=32)
                             cAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGATGCGGAGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTa                                                                                                              <  2:233536/150‑1 (MQ=17)
                              aGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTAc                                                                                                             >  2:268925/1‑150 (MQ=32)
                                ggCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACag                                                                                                           <  1:852140/150‑1 (MQ=32)
                                 gcgcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCACGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACaga                                                                                                          <  1:73082/150‑1 (MQ=17)
                                  cgcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATAAGTCAGATGATCGCCGCCTCTTGCGCTGGCTATACCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACagag                                                                                                         <  1:80312/150‑1 (MQ=12)
                                         tCCGTCTTGAGCCAGCAAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTACCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAg                                                                                                  <  1:20807/150‑1 (MQ=17)
                                            gTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGtt                                                                                               <  2:207029/150‑1 (MQ=32)
                                            gTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCNAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGtt                                                                                               <  1:793691/150‑1 (MQ=17)
                                             tCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGttt                                                                                              >  2:425244/1‑150 (MQ=32)
                                             tCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGttt                                                                                              >  2:425236/1‑150 (MQ=32)
                                               ttGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCGGGTTTAc                                                                                            >  2:85748/1‑150 (MQ=17)
                                                tGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAg                                                                                                  >  2:495084/1‑143 (MQ=32)
                                                tGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAg                                                                                                  <  1:495084/143‑1 (MQ=32)
                                                         tAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAAc                                                                                  <  1:81881/150‑1 (MQ=32)
                                                             gCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa                                                                              <  1:425236/150‑1 (MQ=32)
                                                             gCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaa                                                                              <  1:425244/150‑1 (MQ=32)
                                                               cTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGTCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaacg                                                                            >  2:568316/1‑150 (MQ=17)
                                                                  aTTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGaaa                                                                         >  1:606808/1‑150 (MQ=32)
                                                                       GATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGc                                                                                                                                  <  1:311241‑M1/88‑1 (MQ=255)
                                                                       GATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGc                                                                                                                                  >  2:311241‑M1/1‑88 (MQ=255)
                                                                       GATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCg                                                                    <  1:1139719‑M1/150‑1 (MQ=255)
                                                                         tCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAggctggctaatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccg                                                                  <  2:117805‑M2/150‑86 (MQ=255)
                                                                         TCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGCGTGCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGa                                                                  >  1:85748‑M1/1‑150 (MQ=255)
                                                                          cAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAtctggctgatcggaatcaggccttagctggctcaagacgga                                                                                                              <  1:273391‑M2/105‑42 (MQ=255)
                                                                          cAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAtctggctgatcggaatcaggccttagctggctcaagacgga                                                                                                              >  2:273391‑M2/1‑64 (MQ=255)
                                                                          cAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAg                                                                 <  2:606808/150‑1 (MQ=32)
                                                                             ccAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggcg                                                              >  2:178885/1‑150 (MQ=32)
                                                                               aGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAggcggc                                                            >  1:856799/1‑150 (MQ=32)
                                                                                       gccgccTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttg                                                    <  1:1027609‑M2/150‑100 (MQ=255)
                                                                                           ccTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggagcattaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccc                                                <  1:259603‑M2/150‑104 (MQ=255)
                                                                                            ctctTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa                                               <  2:297453/150‑1 (MQ=32)
                                                                                              ctTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAggctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaat                                             <  1:760700‑M2/150‑107 (MQ=255)
                                                                                                 gcgcTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAAc                                          >  1:264474/1‑150 (MQ=32)
                                                                                                    cTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCgg                                       <  2:420769/150‑1 (MQ=32)
                                                                                                    cTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCgg                                       <  1:178885/150‑1 (MQ=32)
                                                                                                     tGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCggg                                      <  2:1139719/150‑1 (MQ=32)
                                                                                                      ggCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAggctggctaatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgatttt                                     >  1:117805‑M2/1‑36 (MQ=255)
                                                                                                         tATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGCTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAAt                                  <  1:268925/150‑1 (MQ=17)
                                                                                                           tCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCaa                                                                                         <  1:238325/93‑1 (MQ=34)
                                                                                                           tCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCaa                                                                                         >  2:238325/1‑93 (MQ=34)
                                                                                                             ccGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCa                              >  1:1013353/1‑150 (MQ=32)
                                                                                                              cGCCTTGGGCGCAAGGAGGCGGCGATCNGGCTGGCTAATCNAAATCTNCGGATTATCTGAGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCAc                             >  1:731795/1‑150 (MQ=17)
                                                                                                              cGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCAc                             >  1:649152/1‑150 (MQ=32)
                                                                                                               gCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGTAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCAcc                            >  1:313834/1‑150 (MQ=17)
                                                                                                                      gcgcAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGgcgc                     <  2:856799/150‑1 (MQ=32)
                                                                                                                          aaGGAGGCGGCGATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatc                 >  2:1027609‑M2/1‑16 (MQ=255)
                                                                                                                           aggaggCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa                                               <  2:597593/119‑1 (MQ=32)
                                                                                                                           aggaggCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGgc                >  1:6832/1‑150 (MQ=32)
                                                                                                                           aggaggCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCGCTGa                                               >  1:597593/1‑119 (MQ=17)
                                                                                                                             gaggCGGCGATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatcggg              <  1:434132‑M2/150‑138 (MQ=255)
                                                                                                                             gaggCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGgcgc              <  2:132851/150‑1 (MQ=32)
                                                                                                                                gcggcgATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTcc           >  2:1193101/1‑150 (MQ=32)
                                                                                                                                  ggcgATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatc                 <  2:732778‑M2/142‑135 (MQ=255)
                                                                                                                                  ggcgATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatc                 >  1:732778‑M2/1‑8 (MQ=255)
                                                                                                                                  ggcgATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttacccaatctgattttgtttccgctgctttgctgatcgggcacga         <  1:116644‑M2/150‑143 (MQ=255)
                                                                                                                                  ggcgATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAAGCTTACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCaa         >  1:384167/1‑150 (MQ=12)
                                                                                                                                   gcgATCAtctggctgatcggaatcaggccttaggtggctcaagacggaatgcgcgccctggatcatcagtctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatcgggcacgat        <  2:119404‑M2/150‑144 (MQ=255)
                                                                                                                                     gATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatcgggcacgatac      <  1:125647‑M2/150‑146 (MQ=255)
                                                                                                                                     gATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgt                                    <  2:521638‑M2/120‑116 (MQ=255)
                                                                                                                                     gATCAtctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgt                                    >  1:521638‑M2/1‑5 (MQ=255)
                                                                                                                                      atcatctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatcggacacgatacc     <  2:112188‑M2/150‑147 (MQ=255)
                                                                                                                                       tcatctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatcggacacgataccg    >  1:112188‑M2/1‑3 (MQ=255)
                                                                                                                                        catctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatcgggcacgataccga   >  2:726146‑M2/1‑2 (MQ=255)
                                                                                                                                         atctggctgatcggaatcaggccttagctggctcaagacggaatgcgcgccctggatcatcaggctgcgtatgtagccgtcaccgcgcttgctcatcttgcccaatctgattttgtttccgctgctgtgctgatcgggcacgataccgaa  >  1:27534‑M2/1‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                                     
GTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTGC  >  NC_002947/401235‑401521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.