New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	671774 =	50 (1.110)	4 (0.090)	5/238	NT	8.2%	coding (826/1725 nt)	PP_0573	hypothetical protein
	?	NC_002947	671798 =	42 (0.970)					coding (850/1725 nt)	PP_0573	hypothetical protein

GGCCATCGTCCAAACGTATGCGCGTGCCGGGCTCGCTGCGGTAGCGCGACGCCGACAGCAGCAGTTGGCTACCGGCGGCGTCCAGGTACTGGCTGTAATCGAGGCGCTGGTAATAGACCCGGTCATTGCCAGGGGGCAGCAGCCAGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/671924‑671774 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcAATGACCGGGTCTATT  >  NC_002947/671798‑671813                                                                                                                                                                         GGCCATCGTCCAAACGTATGCGCGTGCCGGGCTCGCTGCGGTAGCGCGACGCCGACAGCAGCAGTTGGCTACCGGCGGCGTCCAGGTACTGGCTGTAATCGAGGCGCTGGTAATAGACCCGGTCATTGCCAGGGGGCAGCAGCCAGCTGG                   <  1:865454/150‑1       CGTCCAAACGTATGCGCGTGCCGGGCCCGCTGCGGTAGCGCAACGCCGACAGCAGCAGTTGGCTACCGGCGGCGTCCAGCTACTGGCTGTAATCGCTGCGCTGGTAATAGACCCGCTCATTGCCAGCTGGCTGCTGCCCCCTGGCAATGA             <  2:367181/150‑1                      GCGTGCCGGGCTCGCTGCGGTAGCGCGACGCCGACAGCAGCAGTTGGCTACCGGCGGCGTCCAGGTACTGGCTGTAATCGAGGCGCTGGTAATAGACCCGGTCATTGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGT       <  2:601592/141‑1                      GCGTGCCGGGCTCGCTGCGGTAGCGCGACGCCGACAGCAGCAGTTGGCTACCGGCGGCGTCCAGGTACTGGCTGTAATCGAGGCGCTGGTAATAGACCCGGGCATTGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGT       >  1:601592/1‑141                                                          GCAGCAGTTGGCTACCGGCGGCGTCCAGGTACTGGCTGTAATCGAGGCGCTGGTAATAGACCCGGTCATTGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATT  >  1:17258/1‑110                                                          GCAGCAGTTGGCTACCGGCGGCGTCCAGGTACTGGCTGTAATCGAGGCGCTGGTAATAGACCCGGTCATTGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATT  <  2:17258/110‑1                                                                                                                                                                         GGCCATCGTCCAAACGTATGCGCGTGCCGGGCTCGCTGCGGTAGCGCGACGCCGACAGCAGCAGTTGGCTACCGGCGGCGTCCAGGTACTGGCTGTAATCGAGGCGCTGGTAATAGACCCGGTCATTGCCAGGGGGCAGCAGCCAGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/671924‑671774 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcAATGACCGGGTCTATT  >  NC_002947/671798‑671813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.