New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	671774 =	50 (1.110)	4 (0.090)	5/238	NT	8.2%	coding (826/1725 nt)	PP_0573	hypothetical protein
	?	NC_002947	671798 =	42 (0.970)					coding (850/1725 nt)	PP_0573	hypothetical protein

GCATGCGCGGCGCAAGCAGCTCAGCGCCGCTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGTTTGGACGATGGCCGCGATATCACCCGCGAG  >  NC_002947/671653‑671941                                                                                                                                                  |                                                                                                                                                gCATGCGCGGCGCAAGCAGCTCAGCGCCGCTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGa                                                                                                                                             >  1:1037710/1‑150 (MQ=255) cgtccaaacgtatgcgcgtgccgggcccgctgcggtagcgcaacgccgacagcagcagttggctaccggcggcgtccagctactggctgtaatcgctgcgctggtaatagacccgctcattgccagctggctgctgccccctggcAATGa                                                                                                                                             <  2:367181‑M2/5‑1 (MQ=255)               agcagcTCAGCGCCGCTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTAcc                                                                                                                               >  2:1062199/1‑150 (MQ=255)                gcgtgccgggctcgctgcggtagcgcgacgccgacagcagcagttggctaccggcggcgtccaggtactggctgtaatcgaggcgctggtaatagacccggtcattgccagctggctgctgccccctggcAATGACCGGGt                                                                                                                                       <  2:601592‑M2/11‑1 (MQ=255)                gcgtgccgggctcgctgcggtagcgcgacgccgacagcagcagttggctaccggcggcgtccaggtactggctgtaatcgaggcgctggtaatagacccgggcattgccagctggctgctgccccctggcAATGACCGGGt                                                                                                                                       >  1:601592‑M2/131‑141 (MQ=255)                gcagcTCAGCGCCGCTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCa                                                                                                                              >  2:1099068/1‑150 (MQ=255)                    cTCAGCGCCGCTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCCTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCCATGACCGGGTCTATTACCAgcgc                                                                                                                          >  2:292625/1‑150 (MQ=255)                     tCAGCGCCGCTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGcc                                                                                                                         >  1:820834/1‑150 (MQ=255)                        gcgcCGCTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCg                                                                                                                      >  2:1087842/1‑150 (MQ=255)                         cgccgcTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGa                                                                                                                     <  1:856322/150‑1 (MQ=255)                              cTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACa                                                                                                                <  1:277741/150‑1 (MQ=255)                               tgtgACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAg                                                                                                               >  2:713862/1‑150 (MQ=255)                                gtgACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGc                                                                                                              <  1:1087842/150‑1 (MQ=255)                                     cGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTa                                                                                                         <  1:657690/150‑1 (MQ=255)                                      gTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCgg                                                                                                                                         >  2:1174145/1‑117 (MQ=255)                                      gTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCgg                                                                                                                                         <  1:1174145/117‑1 (MQ=255)                                           cGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGa                                                                                                   >  2:807693/1‑150 (MQ=255)                                            gACTCCAGCCGTGATGATGAACAGGACCTGATCACTGTGGCCAGCTGTGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGAc                                                                                                  <  2:1037710/150‑1 (MQ=255)                                                    gcagcagttggctaccggcggcgtccaggtactggctgtaatcgaggcgctggtaatagacccggtcattgccagctggctgctgccccctggcAATGACCGGGTCTAtt                                                                                                                                  >  1:17258‑M2/95‑110 (MQ=255)                                                    gcagcagttggctaccggcggcgtccaggtactggctgtaatcgaggcgctggtaatagacccggtcattgccagctggctgctgccccctggcAATGACCGGGTCTAtt                                                                                                                                  <  2:17258‑M2/16‑1 (MQ=255)                                                        gATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCgg                                                                                          <  1:489434/146‑1 (MQ=255)                                                        gATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCgg                                                                                          >  2:489434/1‑146 (MQ=255)                                                           gctgcACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCaa                                                                                   <  1:897598/150‑1 (MQ=255)                                                           gctgcACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCaa                                                                                   >  1:757459/1‑150 (MQ=255)                                                             tgcACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAAct                                                                                 <  2:820834/150‑1 (MQ=255)                                                                acaGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAActgct                                                                              <  1:1062199/150‑1 (MQ=255)                                                                 caGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAActgctg                                                                             <  1:1099068/150‑1 (MQ=255)                                                                       cTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCg                                                                       >  1:5233/1‑150 (MQ=255)                                                                        tGATCACCGTAGCCAGCAATGCACAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCgg                                                                      >  2:833614/1‑150 (MQ=255)                                                                              ccGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTcgc                                                                >  1:122572/1‑150 (MQ=255)                                                                              ccGTAGCCACCCATGCCCAGACCGGCCATGGCTAACGCGTCACGTCGAGCTGGCTGCTGCCCCCTGGCAATTACCGTGTCTATTACCAGCACCTCGCTTACAGCGAGTACCTTGACGACGTCCGTAGCCAACTGCTGCTGTCGGCGTcgc                                                                <  2:241189/150‑1 (MQ=255)                                                                               cGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTcgcg                                                               >  2:1105989/1‑150 (MQ=255)                                                                                 tAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCCGCCTGCGGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCt                                                             <  1:1168175/150‑1 (MQ=255)                                                                                      aGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTNCTGCCCCCTGGCAATGACCGGGTCTAATACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAGCTGCTGCTGTCGGCGTCGCGCAACCGc                                                        >  1:358830/1‑150 (MQ=255)                                                                                      aGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGc                                                        >  2:1109790/1‑150 (MQ=255)                                                                                      aGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGATAGCCAACTGCTGCTGTCg                                                                       <  1:114393/135‑1 (MQ=255)                                                                                      aGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGATAGCCAACTGCTGCTGTCg                                                                       >  2:114393/1‑135 (MQ=255)                                                                                        cAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAg                                                      >  1:227165/1‑150 (MQ=255)                                                                                              ccAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGcc                                                >  1:908205/1‑150 (MQ=255)                                                                                                         aTGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGAc                                                                                                  >  2:839308/1‑89 (MQ=255)                                                                                                         aTGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGAc                                                                                                  <  1:839308/89‑1 (MQ=255)                                                                                                         aTGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGGTACCGCAGCGAGCCCGGCACGCGCa                                     >  1:469748/1‑150 (MQ=255)                                                                                                          aatagacccggtcattGCCAGGGGGCAGCAGCCAGCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAActgctgc                                                                            <  2:17258‑M1/94‑1 (MQ=255)                                                                                                          aatagacccggtcattGCCAGGGGGCAGCAGCCAGCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAActgctgc                                                                            >  1:17258‑M1/17‑110 (MQ=255)                                                                                                              gAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGt                                <  2:704871/150‑1 (MQ=255)                                                                                                               acccggtcattGCCAGGGGGCAGCAGCCAGCTGGCAATGCCCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCAcgc                                        >  1:601592‑M1/12‑141 (MQ=255)                                                                                                               acccggtcattGCCAGGGGGCAGCAGCCAGCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCAcgc                                        <  2:601592‑M1/130‑1 (MQ=255)                                                                                                                   cgTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGTTTGGa                           <  1:943673/150‑1 (MQ=255)                                                                                                                     tcattGCCAGGGGGCAGCAGCCAGCTGGCAATGAGCGGGTCTATTACCAGCGCAGCGATTACAGCCAGTAGCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTTGCGCTACCGCAGCGGGCCCGGCACGCGCATACGTTTGGACg                         <  2:367181‑M1/145‑1 (MQ=255)                                                                                                                     tCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTa                                                                                        >  2:717393/1‑87 (MQ=255)                                                                                                                     tCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTa                                                                                        <  1:717393/87‑1 (MQ=255)                                                                                                                     tCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGTTTGGACg                         >  1:1139494/1‑150 (MQ=255)                                                                                                                       aCGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGTTTGGACGAt                       <  2:594121/150‑1 (MQ=255)                                                                                                                           CCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGTTTGGACGATGGcc                   <  1:865454‑M1/150‑1 (MQ=255)                                                                                                                                           cccTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGTTTGGACGATGGCCGCGATATCACCCGCGa   <  1:833614/150‑1 (MQ=255)                                                                                                                                            ccTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGc                                                 >  2:333051/1‑103 (MQ=255)                                                                                                                                            ccTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGc                                                 <  1:333051/103‑1 (MQ=255)                                                                                                                                            ccTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGTTTGGACGATGGCCGCGATATCACCCGCGAg  >  1:377675/1‑150 (MQ=255)                                                                                                                                            ccTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGTTTGGACGATGGCCGCGATATCACCCGCGAg  <  1:292625/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                GCATGCGCGGCGCAAGCAGCTCAGCGCCGCTGTGACCGTGGCCGACTCCAGCCGTGATGCTGCACAGGCCCTGATCACCGTAGCCAGCAATGCCCAGACCCGCCATGGCGAACGCGTCACGGCCAGCTGGCTGCTGCCCCCTGGCAATGACCGGGTCTATTACCAGCGCCTCGATTACAGCCAGTACCTGGACGCCGCCGGTAGCCAACTGCTGCTGTCGGCGTCGCGCTACCGCAGCGAGCCCGGCACGCGCATACGTTTGGACGATGGCCGCGATATCACCCGCGAG  >  NC_002947/671653‑671941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.