New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1175069 =	47 (1.040)	5 (0.110)	5/240	NT	10.4%	coding (138/558 nt)	PP_1030	hypothetical protein
	?	NC_002947	1175092 =	41 (0.940)					coding (161/558 nt)	PP_1030	hypothetical protein

GCAACCGGCTTCTTCGAGGAAGCCTTCGGTGGGGGTATAGATGCAGCGTTTGAGCATCACTTCCAGGCCGTTGACCGGTTCGCCGAAGGGCAGTTTTTCCGGGTGCAGGGCCACTTTGCGCGCCCCTGCCGCCAGGG‑CATGGCCCATGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1175219‑1175069 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCAGGGGCGCGCAAAGTGGCCCTGCACCCGGAAAAACTGCCCTTCGGCGAACCGGTCAACGGCCTGGAAGTGATGCTCAAACGCTGCATCTATACCCCCACCGAAGGCTTCCTCGAAGAAGCCGGTTGCCCGGAGTGCCGGCGCGAGGTA  >  NC_002947/1175092‑1175240                                                                                                                                                                                                                                                                                                               GCAACCGGCTTCTTCGAGGAAGCCTTCGGTGGGGGTATAGATGCAGCGTTTGAGCATCACTTCCAGGCCGTTGACCGGTTCGCCGAAGGGCAGTTTTTCCGGGTGCAGGGCCACTTTGCGCGCCCCTGCCGCCAGGG‑CATGGCCCATGCG                                                                                                                                                        <  1:994644/150‑1                     cGCCTTCCGTGGTGTTATAGATGCTGCGTTTGAGCATCACTTCCAGGCCGTTGACCGGTTCGCCGAAGGGCAGTTTTTCCGGGTGCAGGGCCACTTTGCGCGCCCCTGCCGCATGGGCCAT‑GCCCTGGCGGCAGGGGCGCGCAAAGTGGC                                                                                                                                    <  2:670638/149‑1                                                                                                                            CCCTGCCGCCAGGG‑CATGGCCCATGCGGCAGGGGCGCGCAAAGTGGCCCTGCACCCGGAAAAACTGCCCTTCGG                                                                                                         >  1:886177/1‑74                                                                                                                            CCCTGCCGCCAGGG‑CATGGCCCATGCGGCAGGGGCGCGCAAAGTGGCCCTGCACCCGGAAAAACTGCCCTTCGG                                                                                                         <  2:886177/74‑1                                                                                                                               TGCCGCCAGGG‑CATGGCCCATGCGGCAGGGGCGCGCAAAGTGGCCCTGCACCCGGAAAAACTGCCCTTCGGCGAACCGGTCAACGGCCTGGAAGTGATGCTCAAACGCTGCATCTATACCCCCACCGAAGGCTTCCTCGAAGAAGCCGGT                          >  1:968995/1‑150                                                                                                                                       GGG‑CATGGCCCATGCGGCAGGGGCGCGCAAAGTGGCCCTGCACCCGGAAAAACTGCCCTTCGGCGAACCGGTCAACGGCCTGGAAGTGATGCTCAAACGCTGCATCTATACCCCCACCGAAGGCTTCCTCGAAGAAGCCGGTTGCCCGGA                  <  1:670638/150‑1                                                                                                                                                     GCGGCAGGGGCGCGCAAAGTGGCCCTGCACCCGGAAAAACTGCCCTTCGGCGAACCGGTCAACGGCCTGGAAGTGATGCTCAAACGCTGCATCTATACCCCCACCGAAGGCTTCCTCGAAGAAGCCGGTTGCCCGGAGTGCCGGCGCGAG     <  2:994644/150‑1                                                                                                                                                        GCAGGGGCGCGCAAAGTGGCCCTGCACCCGGAAAAACTGCCCTTCGGCGAACCGGTCAACGGCCTGGAAGTGATGCTCAAACGCTGCATCTATACCCCCACCGAAGGCTTCCTCGAAGAAGCCGGTTGCCCGGAGTGCCGGCGCGAGGTA  <  2:146235/150‑1                                                                                                                                                                                                                                                                                                               GCAACCGGCTTCTTCGAGGAAGCCTTCGGTGGGGGTATAGATGCAGCGTTTGAGCATCACTTCCAGGCCGTTGACCGGTTCGCCGAAGGGCAGTTTTTCCGGGTGCAGGGCCACTTTGCGCGCCCCTGCCGCCAGGG‑CATGGCCCATGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1175219‑1175069 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggCAGGGGCGCGCAAAGTGGCCCTGCACCCGGAAAAACTGCCCTTCGGCGAACCGGTCAACGGCCTGGAAGTGATGCTCAAACGCTGCATCTATACCCCCACCGAAGGCTTCCTCGAAGAAGCCGGTTGCCCGGAGTGCCGGCGCGAGGTA  >  NC_002947/1175092‑1175240

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.