| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1223780 | 46 (1.020) | 5 (0.120) | 3/236 | NT | 10.1% | coding (272/771 nt) | gltL | glutamate/aspartate ABC transporter ATP binding protein |
| ? | NC_002947 | = 1223795 | 45 (1.050) | coding (257/771 nt) | gltL | glutamate/aspartate ABC transporter ATP binding protein | |||||
GCATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1223627‑1223780‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccaAGCTGCGCTCGC‑GCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACC < NC_002947/1223795‑1223649 GCATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATG > 1:611350/1‑150 TGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCC > 2:942464/1‑150 TGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGCTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCC > 2:407969/1‑150 TTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGTGCGCGC‑GCGTGGGCATG > 1:379993/1‑99 TTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGC‑GCGTGGGCATG < 1:418643/99‑1 TTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGC‑GCGTGGGCATG < 2:379993/99‑1 TTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCAAGCTGCGCTCGC‑GCGTGGGCATG > 2:418643/1‑99 TGGAACACCATGCCCACGC‑GCGAGCGCAGCTTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTG > 2:611350/1‑150 GCCCAAGCTGCGCTCGC‑GCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGTCCTGGCGCTGCTCGA > 1:4835/1‑150 GCCCAAGCTGCGCTCGC‑GCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAG > 1:288886/1‑130 GCCCAAGCTGCGCTCGC‑GCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAG < 2:288886/130‑1 CCAAGCTGCGCTCGC‑GCGTTGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACC < 2:557525/150‑1 CAAGCTGCGCTCGC‑GCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAG > 1:387766/1‑112 CAAGCTGCGCTCGC‑GCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAG < 2:387766/112‑1 GCATGGGCACTGAGGCCTACACGGTCGAGCAGCGCCAGGCCCTTCTTGGTGGCTTCCGCCTCGCTGCGGCCCAGTACCTTGCGCTGGGCAATGGTCAGGTTCTCGGTGATGGTCAGGTGCGGGAACAGCTCGAAGTGCTGGAACACCATGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1223627‑1223780‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccaAGCTGCGCTCGC‑GCGTGGGCATGGTGTTCCAGCACTTCGAGCTGTTCCCGCACCTGACCATCACCGAGAACCTGACCATTGCCCAGCGCAAGGTACTGGGCCGCAGCGAGGCGGAAGCCACCAAGAAGGGCCTGGCGCTGCTCGACC < NC_002947/1223795‑1223649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |