| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1380504 | 42 (0.930) | 8 (0.200) | 8/224 | NT | 16.3% | intergenic (‑224/+38) | PP_1202/PP_t67 | phospholipids modification protein/tRNA‑Met |
| ? | NC_002947 | = 1380519 | 44 (1.080) | intergenic (‑239/+23) | PP_1202/PP_t67 | phospholipids modification protein/tRNA‑Met | |||||
CCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1380364‑1380504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaaaccccgc‑CTGTGTAAAAGCAGCGCGGGGTTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGCCCAGGATGAACTATCTTTAACCCTGCCAAGCCGCTG < NC_002947/1380519‑1380381 CCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGC‑CTGTGTAAA > 2:344880/1‑150 AGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACC > 1:1161206/1‑129 AGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACC < 2:1161206/129‑1 CGTTTGCAGGGGCTTGGCGGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCCAGCCTGCGGGTGGTGAGGAGGGGAGGGCAAATCGAGGCGCCGAAAGTCAGGGACGTATAATGCAACAAACCCCGC‑CTGTGTAAAAGCAGCGCGGG < 1:688203/150‑1 GTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGC‑CTGTGTAAAAGCAGCGCGGGG < 1:963554/150‑1 GCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGC‑CTGTGTAAAAGCAGCGCGGGGTTTGTTGCTT < 1:344880/150‑1 GGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGC‑CTGTGTAAAAGCAGCGCGGGGTTTGTT > 1:987237/1‑78 GGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGC‑CTGTGTAAAAGCAGCGCGGGGTTTGTT < 2:987237/78‑1 GTATAAAGCAACAAACCCCGCGCTGCTTTTACACAG‑GCGGGGTTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGC < 1:99975/124‑1 GTATAAAGCAACAAACCCCGCGCTGCTTTTACACAG‑GCGGGGGTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGC > 2:99975/1‑124 ACAAACCCCGC‑CTGTGTAAAAGCAGCGCGGGGTTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGCCCAGGATGAACTATCTTTAACCCTGCCAAGCCGCTG > 1:118877/1‑150 ACAAACCCCGC‑CTGTGTAAAAGCAGCGCGGGGTTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGCCCAGGATGAACTATCTTTAACCCTGCCAAGCCGCTG < 2:118877/150‑1 AAACCCCGC‑CTGTGTAAAAGCAGCGCGGGGTTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGCCCAGGATGAACTATCTTTAACCCTGC < 1:884339/138‑1 AAACCCCGC‑CTGTGTAAAAGCAGCGCGGGGTTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGCCCAGGATGAACTATCTTTAACCCTGC > 2:884339/1‑138 CCGC‑CTGTGTAAAAGCAGCGCGGGGTTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGCCCAGGATGAACTATCTTTAA > 1:962689/1‑127 CCGC‑CTGTGTAAAAGCAGCGCGGGGTTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGCCCAGGATGAACTATCTTTAA < 2:962689/127‑1 CCGGCCTCAGGCGTTTGCAGCGGCTTGGCAGGGTTAAAGATAGTTCATCCTGGGCACGACATCTCAAGCCTGCGGGTTGGCATGAGGGGAGGGAAAATCGAGGCGACGAAAGTCAGGGAGGTATAAAGCAACAAACCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1380364‑1380504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaaaccccgc‑CTGTGTAAAAGCAGCGCGGGGTTTGTTGCTTTATACCTCCCTGACTTTCGTCGCCTCGATTTTCCCTCCCCTCATGCCAACCCGCAGGCTTGAGATGTCGTGCCCAGGATGAACTATCTTTAACCCTGCCAAGCCGCTG < NC_002947/1380519‑1380381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |