New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1398016	33 (0.730)	3 (0.070)	3/238	NT	8.3%	coding (958/1119 nt)	tolA	colicin S4/filamentous phage transport protein
	?	NC_002947	= 1398047	35 (0.810)					coding (989/1119 nt)	tolA	colicin S4/filamentous phage transport protein

GATCCGCATGCGCGCGGCCGAGGGCTGGGCACGTCCGCCTTCCGCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1397907‑1398016 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcaTACGGGCCGTCACCACTGGACCGGGCCACGCTGACATTGGTGATGG  <  NC_002947/1398047‑1398002                                                                                                                                                              GATCCGCATGCGCGCGGCCGAGGGCTGGGCACGTCCGCCTTCCGCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCATACGGGCCGTCACCACTGGACCGGGCCACGCTGACATTGG        <  2:36109/150‑1                                                GCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCATACGGGCCGTCACCACTGGACCGGGCCACGCTGACATTGGTGATGG  <  1:39111/109‑1                                                GCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCATACGGGCCGTCACCACTGGACCGGGCCACGCTGACATTGGTGATGG  >  2:39111/1‑109                                                               TGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCA                                                <  1:1046028/48‑1                                                               TGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCA                                                >  2:1046028/1‑48                                                                                                                                                              GATCCGCATGCGCGCGGCCGAGGGCTGGGCACGTCCGCCTTCCGCGCGCAAGGGCATGACGGTGGTCCTGCAGATCAACATGTTGCCGGACGGTACCATCACCAATGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1397907‑1398016 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcaTACGGGCCGTCACCACTGGACCGGGCCACGCTGACATTGGTGATGG  <  NC_002947/1398047‑1398002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.