New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1436018 = | 45 (1.000) | 6 (0.140) | 5/236 | NT | 11.0% | intergenic (‑48/+105) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
? | NC_002947 | 1436109 = | 54 (1.260) | intergenic (‑139/+14) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
TGTTCCGCAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1436172‑1436018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagggAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAA > NC_002947/1436109‑1436170 TGTTCCGCAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTA < 2:207123/150‑1 gatctAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAG < 1:1163285/145‑1 gatctAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAG < 1:1163321/145‑1 CCGCAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGG < 2:454615/150‑1 CGCAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGG > 1:838145/1‑150 CATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGG < 1:509520/115‑1 CATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGG > 2:509520/1‑115 CCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACGGGCTTCGCCGGTGTTCGCGCCTACGCCCGCTCCCACAGGGAGAGCCGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCtg > 2:171030/1‑148 CCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTT < 1:901317/118‑1 CCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTT > 2:901317/1‑118 TGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAA > 2:806198/1‑150 GCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTG > 1:282799/1‑106 GCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTG < 2:282799/106‑1 TGTTCCGCAGCTGGTATGCCAGCTGGTCGGCCGAGCAAAACATCGCCTGAGCAGCCACTGCTCTCCCTGTGGGAGCGGGCGTGCCCGCGAATCAGGCGACCCGGTGCATGGCACCGGCTTCGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1436172‑1436018 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acagggAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTGGCATACCAGCTGCGGAA > NC_002947/1436109‑1436170 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |