New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2049046 = | 47 (1.040) | 3 (0.070) | 3/236 | NT | 6.0% | coding (269/372 nt) | PP_1822 | hypothetical protein |
? | NC_002947 | 2049089 = | 49 (1.140) | coding (226/372 nt) | PP_1822 | hypothetical protein |
CAAGGGGCTGGCGCTGTACCAGTTCCACGCCTGCCCGTTCTGTGTCAAAACCCGCCGCACACTGCACCGCTTGAACGTGCCGGTGGCGCTGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2049195‑2049046 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggtCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTG > NC_002947/2049089‑2049237 CAAGGGGCTGGCGCTGTACCAGTTCCACGCCTGCCCGTTCTGTGTCAAAACCCGCCGCACACTGCACCGCTTGAACGTGCCGGTGGCGCTGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGT > 1:15988/1‑150 TGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGG > 2:1157/1‑150 AAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGA < 1:620373/113‑1 AAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGA > 2:620373/1‑113 CCGGGTCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGC < 2:6748/150‑1 TCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTG > 1:779551/1‑150 CAAGGGGCTGGCGCTGTACCAGTTCCACGCCTGCCCGTTCTGTGTCAAAACCCGCCGCACACTGCACCGCTTGAACGTGCCGGTGGCGCTGCGCGACGCCAAGAACGACCCGGTGCACCGCCAGGCCCTGCAGGAAGGTGGCGGCCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2049195‑2049046 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggtCGTTCTTGGCGTCGCGCAGCGCCACCGGCACGTTCAAGCGGTGCAGTGTGCGGCGGGTTTTGACACAGAACGGGCAGGCGTGGAACTGGTACAGCGCCAGCCCCTTGGCCGCTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTG > NC_002947/2049089‑2049237 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |