| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2063975 | 50 (1.110) | 6 (0.140) | 5/238 | NT | 11.0% | coding (169/333 nt) | PP_1840 | hypothetical protein |
| ? | NC_002947 | = 2063996 | 49 (1.130) | coding (190/333 nt) | PP_1840 | hypothetical protein | |||||
GATATCAGCAGCAACGTCCTGCGCCAGATGAAGGCAGGCGGTTTCGACTTCACCCAGATCCACCCCATCGAGTTCTATGCCGTATTCCCGGACGAAGCAGGGGCCCGTCGTGCAGCCGGGCAGTTTCGCGGGGAATCGCTCAATGC‑‑‑‑‑‑‑CCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2063825‑2063975‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGCCCCTGCTTCGTCCGGGAATACGGCATAGAACTCGATGGGGTGGATCTGGGTGAA < NC_002947/2063996‑2063873 GATATCAGCAGCAACGTCCTGCGCCAGATGAAGGCAGGCGGTTTCGACTTCACCCAGATCCACCCCATCGAGTTCTATGCCGTATTCCCGGACGAAGCAGGGGCCCGTCGTGCAGCCGGGCAGTTTCGCGGGGAATCGCTCAATGC‑‑‑‑‑‑‑CCAG > 1:519085/1‑150 GCAGGCGGTTTCGACTTCACCCAGATCCACCCCATCGAGTTCTATGCCGTATTCCCGGACGAAGCAGGGGCCCGTCGTGCAGCCGGGCAGTTTCGCGGGGAATCGCTCAATGCCCAGGTGCCAGGCCCCGTCGCCCAGCTCCTTCACCTG < 1:749576/150‑1 AGGCGGTTTCGACTTCACCCAGATCCACCCCATCGAGTTCTATGCCGTATTCCCGGACGAAGCAGGGGCCCGTCGTGCAGCCGGGCAGTTTCGCGGGGAATCGCTCAATGC‑‑‑‑‑‑‑CCAGGCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAG < 2:954368/150‑1 TTCACCCAGATCCACCCCATCGAGTTCTATGCCGTATTCCCGGACGAAGCAGGGGCCCGTCGTGCAGCCGGGCAGTTTCGCGGGGAATCGCTCAATG‑‑‑‑‑‑‑‑CCAGGCCCCGTCGCCCAGCTCCTTCACCTGGGCA < 1:1084459/131‑1 TTCACCCAGATCCACCCCATCGAGTTCTATGCCGTATTCCCGGACGAAGCAGGGGCCCGTCGTGCAGCCGGGCAGTTTCGCGGGGAATCGCTCAATG‑‑‑‑‑‑‑‑CCAGGCCCCGTCGCCCAGCTCCTTCACCTGGGCA > 2:1084459/1‑131 ACCCCATCGAGTTCTATGCCGTATTCCCGGACGAAGCAGGGGCCCGTCGTGCAGCCGGGCAGTTTCGCGGGGAATCGCTCAATGC‑‑‑‑‑‑‑CCAGGCCCCGTCGCCCAGCTCCTTCACCTGG > 1:891828/1‑116 ACCCCATCGAGTTCTATGCCGTATTCCCGGACGAAGCAGGGGCCCGTCGTGCAGCCGGGCAGTTTCGCGGGGAATCGCTCAATGC‑‑‑‑‑‑‑CCAGGCCCCGTCGCCCAGCTCCTTCACCTGG < 2:891828/116‑1 CCAGGCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGCCCCTGCTTCGTCCGGGAATACGGCATAGAACTCGTTGGGGTGGATCTGGGTGAA > 1:130516/1‑129 CCAGGCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGCCCCTGCTTCGTCCGGGAATACGGCATAGAACTCGATGGGGTGGATCTGGGTGAA < 2:130516/129‑1 CAGGCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGCCCCTGCTTCGTCCGGGAATACGGCATAGAACTCGATG > 1:200248/1‑111 CAGGCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGCCCCTGCTTCGTCCGGGAATACGGCATAGAACTCGATG < 2:200248/111‑1 AGGCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGC > 1:183252/1‑73 AGGCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGC < 2:183252/73‑1 GGCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGCCCCTGCTTCGTCCGGGAATACGGCATAGAACTCGATG < 1:488083/109‑1 GGCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGCCCCTGCTTCGTCCGGGAATACGGCATAGAACTCGATG > 2:488083/1‑109 GATATCAGCAGCAACGTCCTGCGCCAGATGAAGGCAGGCGGTTTCGACTTCACCCAGATCCACCCCATCGAGTTCTATGCCGTATTCCCGGACGAAGCAGGGGCCCGTCGTGCAGCCGGGCAGTTTCGCGGGGAATCGCTCAATGC‑‑‑‑‑‑‑CCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2063825‑2063975‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggCCCCGTCGCCCAGCTCCTTCACCTGGGCATTGAGCGATTCCCCGCGAAACTGCCCGGCTGCACGACGGGCCCCTGCTTCGTCCGGGAATACGGCATAGAACTCGATGGGGTGGATCTGGGTGAA < NC_002947/2063996‑2063873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |