| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2100003 = | 32 (0.710) | 6 (0.160) | 6/202 | NT | 17.4% | intergenic (‑71/‑134) | PP_1875/PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein |
| ? | NC_002947 | 2100098 = | 31 (0.840) | intergenic (‑166/‑39) | PP_1875/PP_1876 | two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein | |||||
GGCGCGGTCCAGAAAAGCGATCAAGCGAGCGTCCATGACGACTCCTAACAATCTCAGTTTTTTGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAAGCCCGCGGAGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2100172‑2100003‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcaagcccgcggaggggcgcGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGG > NC_002947/2100098‑2100245 GGCGCGGTCCAGAAAAGCGATCAAGCGAGCGTCCATGACGACTCCTAACAATCTCAGTTTTTTGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGG < 2:478521/150‑1 CGGTCCAGAAAAGCGATCAAGCGAGCGTCCATGACGACTCCTAACAATCTCAGTTTTTTGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAA < 1:376116/150‑1 GCGATCAAGCGAGCGTCCATGACGACTCCTAACAATCTCAGTTTTTTGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGCGAACGGGCATGCCCGCGGAGGG < 2:1104360/150‑1 TCAAGCGAGCGTCCATGACGACTCCTAACAATCTCAGTTTTTTGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAAGCCCGCGGAGGGGCGC < 1:593827/150‑1 ATGACGACTCCTAACAATCTCAGTTTTTTGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAA < 1:1083733/120‑1 ATGACGACTCCTAACAATCTCAGTTTTTTGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAA > 2:1083733/1‑120 GGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGG > 2:571121/1‑86 GGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGG < 1:571121/86‑1 CCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTG > 2:527656/1‑142 CCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTG < 1:527656/142‑1 CCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCC > 1:273813/1‑150 CCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCCGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCG > 1:760334/1‑150 CACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGG > 1:108179/1‑150 GCTAAGCTGTACCTGTGGGAACGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGT < 2:108179/150‑1 CGGGCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACA < 2:903180/150‑1 GCAAGCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCAGGCACAACGCCCGCACATCG > 2:1028372/1‑150 GCCCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTG > 2:700501/1‑150 CCGCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGG > 2:138292/1‑150 GCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGC < 2:1033973/150‑1 GCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCA < 2:321272/137‑1 GCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCA > 1:321272/1‑137 GCGGAGGGGCGCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGA < 1:1025136/56‑1 GCGGAGGGGCGCCAAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGA > 2:1025136/1‑56 GCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGG < 2:383104/150‑1 GCGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGG < 1:138292/150‑1 GGCGCGGTCCAGAAAAGCGATCAAGCGAGCGTCCATGACGACTCCTAACAATCTCAGTTTTTTGGGGGCCGCTGCGCGCCCCTCCGCGGGCTTGCCCGCTCCCACAGGGCTTGCGTTCAGCCTGGGGCTAAGCTGTACCTGTGGGAACGGGCAAGCCCGCGGAGGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2100172‑2100003‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcaagcccgcggaggggcgcGCAGCGGCCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGG > NC_002947/2100098‑2100245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |