New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2342921	46 (1.020)	6 (0.140)	6/238	NT	12.1%	coding (730/1254 nt)	PP_2058	porin
	?	NC_002947	= 2342940	43 (0.990)					coding (749/1254 nt)	PP_2058	porin

GGCTGTACCTGGACGGGTATGGCGGCCCAGCGTCTGGCGATTTCAGCTTCGCCGGTGCTGACTATGCCGTCAGCAAGCAACTGCGCCTGAGTTATTTCCATGGCGAGCTCGAGCATTTCTACCGCCAGGACTTCGCCGG‑‑GCTGGT‑‑GCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2342772‑2342921 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgCCGCCGCCCAGCGGCAGGTCGTGCACCAGCCCGGCGAAGTCCTGGCGGTAGAAATGCTCGAGCTCGCCATGGAAATAACTCAGGCGCAGTTGCTTGCTGACGGCATAGTCAGCACCGGCGAAGCTGAAATCGCCAGACGCTGGGCCGC  <  NC_002947/2342940‑2342793                                                                                                                                                                                                                                                                                                                GGCTGTACCTGGACGGGTATGGCGGCCCAGCGTCTGGCGATTTCAGCTTCGCCGGTGCTGACTATGCCGTCAGCAAGCAACTGCGCCTGAGTTATTTCCATGGCGAGCTCGAGCATTTCTACCGCCAGGACTTCGCCGG‑‑GCTGGT‑‑GCACG                                                                                                                                                      >  1:942619/1‑150             ACGGGTATGGCGGCCCAGCGTCTGGCGATTTCAGCTTCGCCGGTGCTGACTATGCCGTCAGCAAGCAACTGCGCCTGAGTTATTTCCATGGCGAGCTCGAGCATTTCTACCGCCAGGACTTCGCCGG‑‑GCTGGT‑‑GCACGCCGCCGCCCAGC                                                                                                                                          <  1:186693/150‑1                      GCGGCCCAGCGTCTGGCGATTTCAGCTTCGCCGGTGCTGACTATGCCGTCAGCAAGCAACTGCGCCTGAGTTATTTCCATGGCGAGCTCGAGCATTTCTACCGCCAGGACTTCGCCGG‑‑GCTGGT‑‑GCACGCCGCCGCCCAGCGGCAGGTCG                                                                                                                                 >  1:1022514/1‑150                                  CTGGCGATTTCAGCTTCGCCGGTGCTGACTATGCCGTCAGCAAGCAACTGCGCCTGAGTTATTTCCATGGCGAGCTCGAGCATTTCTACCGCCAGGACTTCGCCGG‑‑GCTGGT‑‑GCACGCCGCCGCCCAGCGGCAGGTCGTGCACCAGCCCG                                                                                                                     <  2:1022514/150‑1                                           TCAGCTTCGCCGGTGCTGACTATGCCGTCAGCAAGCAACTGCGCCTGAGTTATTTCCATGGCGAGCTCGAGCATTTCTACCGCCAGGACTTCGCAGGTCGGTGGTCAGCACGCCGCCGCCCAGCGGCAGGTCGTGCACCAGCCCGGCGAA                                                                                                                <  2:52017/150‑1                                                                                            TTATTTCCATGGCGAGCTCGAGCATTTCTACCGCCAGGACTTCGCCGG‑‑GCTGGT‑‑GCACGCCGCCGCCCAGCGGCAGGTCGTGC                                                                                                                              <  1:1122692/83‑1                                                                                            TTATTTCCATGGCGAGCTCGAGCATTTCTACCGCCAGGACTTCGCCGG‑‑GCTGGT‑‑GCACGCCGCCGCCCAGCGGCAGGTCGTGC                                                                                                                              >  2:1122692/1‑83                                                                                                                                                        ACGCCGCCGCCCAGCGGCAGGTCGTGCACCAGCCCGGCGAAGTCCTGGCGGTAGAAATGCTCGAGCTCGCCATGGAAATAACTCAGGCGCAGTTGCTTGCTGACGGCATAGTCAGCACCGGCGAAGCTGAAATCGCCAGACGCTGGGCCG   >  1:801512/1‑150                                                                                                                                                        ACGCCGCCGCCCAGCGGCAGGTCGTGCACCAGCCCGGCGAAGTCCTGGCGGTAGAAATGCTCGAGCTCGCCATGGAAATAACTCAGGCGCAGTTGCTTGCTGACGGCATAGTCAGCACCGGCGAAGCTGAAATCGCCAGACGCTGGGCCG   >  1:848449/1‑150                                                                                                                                                         CGCCGCCGCCCAGCGGCAGGTCGTGCACCAGCCCGGCGAAGTCCTGGCGGTAGAAATGCTCGAGCTCGCCATGGAAATAACTCAGGCGCAGTTGCTTGCTGACGGCATAGTCAGCACCGGCGAAGCTGAAATCGCCAGACGCTGGGCCGC  <  1:555138/150‑1                                                                                                                                                                                                                                                                                                                GGCTGTACCTGGACGGGTATGGCGGCCCAGCGTCTGGCGATTTCAGCTTCGCCGGTGCTGACTATGCCGTCAGCAAGCAACTGCGCCTGAGTTATTTCCATGGCGAGCTCGAGCATTTCTACCGCCAGGACTTCGCCGG‑‑GCTGGT‑‑GCACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2342772‑2342921 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacgCCGCCGCCCAGCGGCAGGTCGTGCACCAGCCCGGCGAAGTCCTGGCGGTAGAAATGCTCGAGCTCGCCATGGAAATAACTCAGGCGCAGTTGCTTGCTGACGGCATAGTCAGCACCGGCGAAGCTGAAATCGCCAGACGCTGGGCCGC  <  NC_002947/2342940‑2342793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.