New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2407988 =	43 (0.950)	4 (0.090)	4/240	NT	9.3%	coding (620/1566 nt)	PP_2111	aerotaxis receptor
	?	NC_002947	2408046 =	36 (0.820)					coding (562/1566 nt)	PP_2111	aerotaxis receptor

CATCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2408140‑2407988 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATC  >  NC_002947/2408046‑2408134                                                                                                                                                                                                                                                    CATCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGA                                                                                              <  2:1149288/150‑1   TCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCCGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGC                                                                                            <  1:1000695/150‑1                                            GGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGA                                                                                              >  1:1051878/1‑107                                            GGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGA                                                                                              <  2:1051878/107‑1                                                                                TCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAA                  >  1:840110/1‑147                                                                                TCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAA                  <  2:840110/147‑1                                                                                                  CTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGATGCCCACCTGGCTGATC  >  2:232592/1‑145                                                                                                  CTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCAGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATC  <  1:232592/145‑1                                                                                                                                                                                                                                                    CATCCTGATCAGCCAGGTGGGCTTCCTGATCGGCAACTGGCTGGGTCATTCCTGGGGCTTTGCCTTGGCCGCAGGGCTTTCGGTACCACTGGGTCTGCTTGGCCTGAGCTGGCAGCAGCGCGGCCTCAAGCGCCTGCTGCGCCTGGCCGAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2408140‑2407988 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaGACCCAGTGGTACCGAAAGCCCTGCGGCCAAGGCAAAGCCCCAGGAATGACCCAGCCAGTTGCCGATCAGGAAGCCCACCTGGCTGATC  >  NC_002947/2408046‑2408134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.