New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2473723	43 (0.950)	3 (0.070)	3/238	NT	6.6%	coding (416/1851 nt)	PP_2167	PhoD‑like phosphatase
	?	NC_002947	= 2473768	44 (1.020)					coding (371/1851 nt)	PP_2167	PhoD‑like phosphatase

CTACCACCGCACCTTCCAGTTGCTCGTCGAACAAGCCCAGGCGCGAGATCAGGCTATGGATGGCGCGCAGCATGGGGCCGGCGACATCGTCGGCGTAAACCTGGTCGCCCGTCATCACTAGCACGGCGGGGCGGTCTTCGGGCTTCTTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2473571‑2473723 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccACCCTGCTGCCGACGGCCTGCTGTGCGCCGACCGGCTGCTGCAGGGGT  <  NC_002947/2473768‑2473721                                                                                                                                                                                                           CTACCACCGCACCTTCCAGTTGCTCGTCGAACAAGCCCAGGCGCGAGATCAGGCTATGGATGGCGCGCAGCATGGGGCCGGCGACATCGTCGGCGTAAACCTGGTCGCCCGTCATCACTAGCACGGCGGGGCGGTCTTCGGGCTTCTTGC                                                     <  2:715997/150‑1                                                    GGCTATGGATGGCGCGCAGCATGGGGCCGGCGACATCGTCGGCGTAAACCTGGTCGCCCGTCATCACTAGCACGGCGGGGCGGTCTTCGGGCTTCTTGCACCACCCTGCTGCCGACGGCCTGCTGTGCGCCGACCGGCTGCTGCAGGGGT  <  1:800627/150‑1                                                                                                     CTGGTCGCCCGTCATCACTAGCACGGCGGGGCGGTCTTCGGGCTTCTTGCACCACCCTGCTGCCGACGGCCTGCTGTGCGCCGA                   <  1:1056071/84‑1                                                                                                     CTGGTCGCCCGTCATCACTAGCACGGCGGGGCGGTCTTCGGGCTTCTTGCACCACCCTGCTGCCGACGGCCTGCTGTGCGCCGA                   >  2:1056071/1‑84                                                                                                                                                                                                           CTACCACCGCACCTTCCAGTTGCTCGTCGAACAAGCCCAGGCGCGAGATCAGGCTATGGATGGCGCGCAGCATGGGGCCGGCGACATCGTCGGCGTAAACCTGGTCGCCCGTCATCACTAGCACGGCGGGGCGGTCTTCGGGCTTCTTGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2473571‑2473723 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccACCCTGCTGCCGACGGCCTGCTGTGCGCCGACCGGCTGCTGCAGGGGT  <  NC_002947/2473768‑2473721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.