New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2981197	36 (0.800)	5 (0.120)	5/228	NT	11.9%	coding (1211/1734 nt)	PP_2607	hypothetical protein
	?	NC_002947	= 2981208	41 (0.990)					coding (1200/1734 nt)	PP_2607	hypothetical protein

GGCGTGGTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2981040‑2981197 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgggcttggCCTGGCG‑CG‑GCCCAAGCCCGTCAACAACCAGGCGTTGATCGACGCAGGCTACCTGTACCGGGCCACCACATCGCAGGCACTGGCCCTGGCCATCGGCGTCGATCCACAGGTGTTTGCGCAAACACTTTCACAGTTCAACAGCGA  <  NC_002947/2981208‑2981065                                                                                                                                                                                                                                                                                                                  GGCGTGGTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGAC                                                                                                                                                            <  2:856849/150‑1  GCGTGGTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACG                                                                                                                                                           <  2:205948/150‑1       GTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTT                                                                                                                                                      >  1:499214/1‑150        TCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTG                                                                                                                                                     <  2:230904/150‑1           ATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGAC                                                                                                                                                            >  1:119905/1‑140           ATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGAC                                                                                                                                                            <  2:119905/140‑1                   GCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGG                                                                                                                                                          >  1:714439/1‑134                   GCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGG                                                                                                                                                          <  2:714439/134‑1                            gcgtgTGAATTTTGAAAGTGTTTGCGCAACCACCTGTGGATCGATCCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGGCCTGGCG‑CG‑GCCCAAGCCC                                                                                                                               <  2:197659/145‑1                                                                                                                                     CAACGCCTGGTTGTTGACGGGCTTGGCCTGGCG‑CG‑GCCCAAGC                                                                                                                                 <  1:570932/43‑1                                                                                                                                     CAACGCCTGGTTGTTGACGGGCTTGGCCTGGCG‑CG‑GCCCAAGC                                                                                                                                 >  2:570932/1‑43                                                                                                                                           CTGGTTGTTGACGGGCTTGGGC‑CGCGCCA‑GGCCAAGCCCGTCAACAACCAGGCGTTGATCGACGCAGGCTACCTGTACCGGGCCACCACATCGCAGGCACTGGC                                                              >  1:1140844/1‑104                                                                                                                                           CTGGTTGTTGACGGGCTTGGGC‑CGCG‑CCAGGCCAAGCCCGTCAACAACCAGGCGTTGATCGACGCAGGCTACCTGTACCGGGCCACCACATCGCAGGCACTGGC                                                              <  2:1140844/104‑1                                                                                                                                                       GGGCTTGGCCTGGCG‑CG‑GCCCAAGCCCGTCAACAACCAGGCGTTGATCGACGCAGGCTACCTGTACCGGGCCACCACATCGCAGGCACTGGCCCTGGCCATCGGCGTCGATCCACAGGTGTTTGCGCAAACACTTTCACAGTTCAACcac    >  2:790178/1‑147                                                                                                                                                       GGGCTTGGCCTGGCG‑CG‑GCCAAAGCCCGTCAACAACCAGGCGTTGATCGACGCAGGCTACCTGTACCGGGCCACCACATC                                                                          >  1:796184/1‑80                                                                                                                                                       GGGCTTGGCCTGGCG‑CG‑GCCAAAGCCCGTCAACAACCAGGCGTTGATCGACGCAGGCTACCTGTACCGGGCCACCACATC                                                                          <  2:796184/80‑1                                                                                                                                                         GCTTGGCCTGGCG‑CG‑GCCCAAGCCCGTCAACAACCAGGCGTTGATCGACGCAGGCTACCTGTACCGGGCCACCACATCGCAGGCACTGGCCCTGGCCATCGGCGTCGATCCACAGGTGTGAGCGCAAACACTTTCACAGTTCAAaaaagc  >  2:499214/1‑144                                                                                                                                                                                                                                                                                                                  GGCGTGGTCGATGCCATTGCCGGCATCGCTGTTGAACTGTGAAAGTGTTTGCGCAAACACCTGTGGATCGACGCCGATGGCCAGGGCCAGTGCCTGCGATGTGGTGGCCCGGTACAGGTAGCCTGCGTCGATCAACGCCTGGTTGTTGACGGGCTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2981040‑2981197 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgggcttggCCTGGCG‑CG‑GCCCAAGCCCGTCAACAACCAGGCGTTGATCGACGCAGGCTACCTGTACCGGGCCACCACATCGCAGGCACTGGCCCTGGCCATCGGCGTCGATCCACAGGTGTTTGCGCAAACACTTTCACAGTTCAACAGCGA  <  NC_002947/2981208‑2981065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.