New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3810697 =	59 (1.310)	3 (0.070)	3/230	NT	5.8%	coding (771/882 nt)	PP_3366	LysR family transcriptional regulator
	?	NC_002947	3810732 =	43 (1.030)					coding (806/882 nt)	PP_3366	LysR family transcriptional regulator

GTGCCGCGGAGCAGGTGATTGCTCATCTCGCCCAGAAGACTGGCCCTCACCGCTCCAGGTAATGCGTCTGTGCAGCAAAGTCGATGAACCGCTTGCTGGCCAGCGACAGGTATTCCCCCGAGCGCCAGCACAAGCGGAAACTCATCTGCTGTGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3810854‑3810697 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgctggcGCTCGGGGGAATACCTGTCGCTGGCCAGCAAGCGGTTCATCGACTTTGCTGCACAGACGCATTACCTGGAGCGGTGAGGGCCAGTCTTCTGGGCGAGATGAGCAATCACCTGCTCCGCGGCACGCCCCAGGCAGCCTTTGAAAA  >  NC_002947/3810732‑3810875                                                                                                                                                                                                                                                                                                                GTGCCGCGGAGCAGGTGATTGCTCATCTCGCCCAGAAGACTGGCCCTCACCGCTCCAGGTAATGCGTCTGTGCAGCAAAGTCGATGAACCCATGTCGTGCCAGCGACAGGTATTCCCCCGAGCGCCAGCACAAGCGGAAACTCATCTGCT                                                                                                                                                          >  1:318082/1‑150                                                                                                                    CCCCGAGCGCCAGCACAAGCGGAAACTCATCTGCTGTGCTGGCGCTCGGGGGCCTACCTGTCGCTGGCCAGCAAGCGGTTCATCGACTTTGCTGCACAGACGCATTACCTGGAGCGGTGAGGGCCAGTCTTCTGGGCGAGATGAGCAATC                                       >  1:86266/1‑150                                                                                                                              CAGCACAAGCGGAAACTCATCTGCTGTGCTGGCGCTCGGGGGAATACCTGTCGCTGGCCAGCAAGCGGTTCATCGACTTTGCTGCACAGACGCATTACCTGGAGCGGTGAGGG                                                                  <  1:1136317/113‑1                                                                                                                              CAGCACAAGCGGAAACTCATCTGCTGTGCTGGCGCTCGGGGGAATACCTGTCGCTGGCCAGCAAGCGGTTCATCGACTTTGCTGCACAGACGCATTACCTGGAGCGGTGAGGG                                                                  >  2:1136317/1‑113                                                                                                                                                         GCTGGCGCTCGGGGGAATACCTGTCGCTGGCCAGCAAGCGGTTCATCGACTTTGCTGCACAGACGCATTACCTGGAGCGGTGAGGGCCAGTCTTCTGGGCGAGATGAGCAATCACCTGCTCCGCGGCACGCCCCAGGCAGCCTTTGAAAA  <  1:884313/150‑1                                                                                                                                                          CTGGCGCTCGGGGGAATACCTGTCGCTGGCCAGCAAGCGGTTCATCGACTTTGCTGCACAGACGCATTACCTGGAGCGGTGAGGGCCAGTCTTCTGGGCGAGATGAGCAATCACCTGCTCCGCGGCAC                       >  1:720302/1‑128                                                                                                                                                          CTGGCGCTCGGGGGAATACCTGTCGCTGGCCAGCAAGCGGTTCATCGACTTTGCTGCACAGACGCATTACCTGGAGCGGTGAGGGCCAGTCTTCTGGGCGAGATGAGCAATCACCTGCTCCGCGGCAC                       <  2:720302/128‑1                                                                                                                                                                                                                                                                                                                GTGCCGCGGAGCAGGTGATTGCTCATCTCGCCCAGAAGACTGGCCCTCACCGCTCCAGGTAATGCGTCTGTGCAGCAAAGTCGATGAACCGCTTGCTGGCCAGCGACAGGTATTCCCCCGAGCGCCAGCACAAGCGGAAACTCATCTGCTGTGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3810854‑3810697 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgctggcGCTCGGGGGAATACCTGTCGCTGGCCAGCAAGCGGTTCATCGACTTTGCTGCACAGACGCATTACCTGGAGCGGTGAGGGCCAGTCTTCTGGGCGAGATGAGCAATCACCTGCTCCGCGGCACGCCCCAGGCAGCCTTTGAAAA  >  NC_002947/3810732‑3810875

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.