| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4117476 = | 47 (1.040) | 5 (0.120) | 4/236 | NT | 10.6% | coding (122/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta |
| ? | NC_002947 | 4117507 = | 40 (0.930) | coding (153/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta | |||||
GAAAGGGCCTTGCCCGCCTTCCATAAAGGGGCTCAGCAGGCGCACCGTGCCGTCCGGGCGAATCTCCAGAAATGCAGGCACCTGGGTGCCGCGTTCCGCAGTTGCCGCAGCGGCGGCTGCTGCCTGCACGCGGGC‑CGAGCCCATGGGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4117627‑4117476‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggcAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATTGTGGGT > NC_002947/4117507‑4117651 GAAAGGGCCTTGCCCGCCTTCCATAAAGGGGCTCAGCAGGCGCACCGTGCCGTCCGGGCGAATCTCCAGAAATGCAGGCACCTGGGTGCCGCGTTCCGCAGTTGCCGCAGCGGCGGCTGCTGCCTGCACGCGGGC‑CGAGCCCATGGGCAG < 1:28198/150‑1 CTTCCATAAAGGGGCTCAGCAGGCGCACCGTGCCGTCCGGGCGAATCTACAGAAATGCAGGCACCTGGGTGCCGCGTTCCGCAGTTGCCGCAGCGGCGGCTGCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGC < 2:811082/150‑1 CTCAGCAGGCGCACCGTGCCGTCCGGGCGAATCTCCAGAAATGCAGGCACCTGGGTGCCGCGTTCCGCAGTTGCCGCAGCGGCGGCTGCTGCCTGCACGCGGGC‑CGAGCCCGTGGGCAGGC > 1:901353/1‑121 CTCAGCAGGCGCACCGTGCCGTCCGGGCGAATCACCAGAAATGCAGGCACCTGGGTGCCGCGTTCCGCAGTTGCCGCAGCGGCGGCTGCTGCCTGCACGCGGGC‑CGAGCCCGTGGGCAGGC < 2:901353/121‑1 TGCCTGCACGCGGGC‑CGAGCCCATGGGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGA > 2:74303/1‑89 TGCCTGCACGCGGGC‑CGAGCCCATGGGCAGGCAGCAGCCGCCGCNGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGA < 1:74303/89‑1 CCTGCACGCGGGC‑CGAGCCCATGGGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGA > 1:130266/1‑87 CCTGCACGCGGGC‑CGAGCCCATGGGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGA < 2:130266/87‑1 CAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTNTGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATTGTGGGT < 1:368394/150‑1 CAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATTGTGGGT < 1:439168/150‑1 GAAAGGGCCTTGCCCGCCTTCCATAAAGGGGCTCAGCAGGCGCACCGTGCCGTCCGGGCGAATCTCCAGAAATGCAGGCACCTGGGTGCCGCGTTCCGCAGTTGCCGCAGCGGCGGCTGCTGCCTGCACGCGGGC‑CGAGCCCATGGGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4117627‑4117476‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggcAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATTGTGGGT > NC_002947/4117507‑4117651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |