New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4117476 = | 47 (1.040) | 5 (0.120) | 4/236 | NT | 10.6% | coding (122/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta |
? | NC_002947 | 4117507 = | 40 (0.930) | coding (153/2256 nt) | PP_3622 | isoquinoline 1‑oxidoreductase subunit beta |
AACACGCCAGTCGATACACCCGCCGAACTGCTCAGGCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATTGTGGGT > NC_002947/4117358‑4117651 | tacatGCCAGGCGATACAACCGCCTAACTGATCAGGCTGCAGCGGGCCGAAACGGCCAAGCTGTCACGTCGGCGCTTGCTTGCCGGCACCGCATTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTgcaggca < 2:526401/149‑1 (MQ=255) cacGCCAGTCGATACACCCGCCGAACTGCTCAGGCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGgcagc > 2:1029338/1‑150 (MQ=255) cttccataaaggggctcagcaggcgcaccgtgccgtccgggcgaatctacagaaatgcaggcacctgggtgccgcgttccgcagttgccgcagcggcggctgcggcctgcccatgggctcggcccgcgtgcaggcAGCAGCCGCCGCTGc < 2:811082‑M2/15‑1 (MQ=255) cccGCCGAACTGCTCAGGCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCa > 2:680835/1‑150 (MQ=255) cgacgAACTGCTCAGGCTGCAGCGGGGCGAAACGGTAAACCTGTCACGTCGGCGCTTTCTTGCCGGCAACGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGACTCG‑GCCAGCGTGCAGGCAGCAGCCGCCGCTGCGGCAAc > 2:849778/4‑150 (MQ=255) gCTCAGGCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAAcg > 1:1144173/1‑150 (MQ=255) tCAGGCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCATGCAGCAGCCGCCGCTGCGGCAACTGCGGAAcgc < 1:584848/149‑1 (MQ=255) tCAGGCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCATGCAGCAGCCGCCGCTGCGGCAACTGCGGAAcgc > 2:584848/1‑149 (MQ=255) tCAGGCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAAcgcg > 2:723454/1‑150 (MQ=255) tCAGGCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACCGCGGAAcgcg < 1:680835/150‑1 (MQ=255) gCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCAc > 2:129799/1‑150 (MQ=255) gCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGt < 1:1006201/150‑1 (MQ=255) ggCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAGCGCGGCTCCCTGGTGCCt < 2:380019/150‑1 (MQ=255) ggCGAAACGGTCAACCCGCCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCt < 2:574273/150‑1 (MQ=255) aCGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCAttt < 2:735889/150‑1 (MQ=255) gTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTg < 1:203406/150‑1 (MQ=255) gTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTg > 1:783375/1‑150 (MQ=255) aaCCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCt > 2:946086/1‑146 (MQ=255) aaCCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCt < 1:946086/146‑1 (MQ=255) tccagaaatgcaggcacctgggtgccgcgttccgcagttgccgcngcggcggctgctGCCTGCCCATGGGCTCG‑GCCCGCGTgcaggca < 1:74303‑M1/32‑1 (MQ=255) tccagaaatgcaggcacctgggtgccgcgttccgcagttgccgcagcggcggctgctGCCTGCCCATGGGCTCG‑GCCCGCGTgcaggca > 2:74303‑M1/58‑89 (MQ=255) tCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGc > 2:82306/1‑150 (MQ=255) tCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCCACGATTCGGCCGGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGc > 2:470966/1‑150 (MQ=255) cACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGcc < 1:890106/150‑1 (MQ=255) tCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGa < 1:723454/150‑1 (MQ=255) gcgcTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACgg > 2:993666/1‑150 (MQ=255) gcgcTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACgg > 1:1009224/1‑150 (MQ=255) gcgcTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATACGCCCGGACgg > 2:936101/1‑150 (MQ=255) tttCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCACGGACGGCaag > 1:16414/1‑148 (MQ=255) ttGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTgc > 2:151658/1‑150 (MQ=255) ccGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGcc > 1:1176672/1‑150 (MQ=255) aGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGccc < 1:151658/150‑1 (MQ=255) tCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCAAGGTGCGCCCGGTAAGCCCCt < 2:16414/150‑1 (MQ=255) gTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTa < 1:784457/150‑1 (MQ=255) gTGCCCTGATGCTAGGTTTCGCCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTa < 2:671429/150‑1 (MQ=255) tGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTAt < 2:709309/150‑1 (MQ=255) gCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATg < 1:82306/150‑1 (MQ=255) gcagcggcggctgctGCCTGCACGCGGGC‑CGAGCCCATGGGCAGGCCGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGTAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAg < 2:811082‑M1/135‑1 (MQ=255) ggTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCcta < 1:1055843/130‑2 (MQ=255) ggTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCcta > 2:1055843/1‑129 (MQ=255) gCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCgg < 2:783375/150‑1 (MQ=255) gTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAg > 2:439168/1‑150 (MQ=255) tttCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCctgct > 1:837847/1‑123 (MQ=255) tttCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCctgct < 2:837847/123‑1 (MQ=255) tgcctgcacgcgggccgagcccatgggcaggcAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGga > 2:74303‑M2/33‑89 (MQ=255) tgcctgcacgcgggccgagcccatgggcaggcAGCAGCCGCCGCNGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGga < 1:74303‑M2/57‑1 (MQ=255) GCCTGCCCACGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGTGATTCGCCCGGACGGCACGGTGCGCCTGCTGAg < 2:901353‑M1/121‑1 (MQ=255) GCCTGCCCACGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAg > 1:901353‑M1/1‑121 (MQ=255) cctgcacgcgggccgagcccatgggcaggcAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGga < 2:130266‑M2/57‑1 (MQ=255) cctgcacgcgggccgagcccatgggcaggcAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGga > 1:130266‑M2/31‑87 (MQ=255) CTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTc < 1:28198‑M1/150‑1 (MQ=255) cATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTCAGCCCCTTTATGGAAGGCGGGCCAGGCCCTTTGCCCGc > 2:368394/1‑150 (MQ=255) gCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTCACCGCCATgg > 1:701896/1‑150 (MQ=255) cgTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATtgt < 1:470966/150‑1 (MQ=255) tGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATTGTgg < 1:176632/150‑1 (MQ=255) caggcAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTNTGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATTGTGGGt < 1:368394‑M2/145‑1 (MQ=255) caggcAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATTGTGGGt < 1:439168‑M2/145‑1 (MQ=255) | AACACGCCAGTCGATACACCCGCCGAACTGCTCAGGCTGCAGCGGGGCGAAACGGTCAACCTGTCACGTCGGCGCTTTCTTGCCGGCACCGCAGTCGGTGCCCTGGTGCTAGGTTTCGGCCTGCCCATGGGCTCG‑GCCCGCGTGCAGGCAGCAGCCGCCGCTGCGGCAACTGCGGAACGCGGCACCCAGGTGCCTGCATTTCTGGAGATTCGCCCGGACGGCACGGTGCGCCTGCTGAGCCCCTTTATGGAAGGCGGGCAAGGCCCTTTCACCGCCATGGCGCAGATTGTGGGT > NC_002947/4117358‑4117651 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |