| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4140190 | 54 (1.200) | 6 (0.140) | 6/232 | NT | 10.4% | intergenic (+38/‑227) | PP_3644/PP_5609 | monooxygenase subunit/hypothetical protein |
| ? | NC_002947 | = 4140213 | 53 (1.260) | intergenic (+61/‑204) | PP_3644/PP_5609 | monooxygenase subunit/hypothetical protein | |||||
AGGAACTGGGCGTCGACGAGTTCAGCTTCTGGTGCGACAACAGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4140040‑4140190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcACGCAGGCCGAAGGGGCCCACGGGAGCGGGCGCGTCCCGCAATGATTCAGGCAATGGGAATTCAGGCGAACGCCGGCACCACTTCCTTGATGAACAGCTCGAGCGACTTCTTCTTCTCGGCGTGGGGCAAGCTGTTGTCGCACCAGAA < NC_002947/4140213‑4140066 AGGAACTGGGCGTCGACGAGTTCAGCTTCTGGTGCGACAACAGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCT > 1:869344/1‑150AGGAACTGGGCGTCGACGAGTTCAGCTTCTGGTGCGACAACAGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCT > 2:227182/1‑150 GGAACTGGGCGTCGACGAGTTCAGCTTCTGGTGCGACAACAGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTC < 1:559389/150‑1 CAACAGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCACGCAGGCCGAAGGGGCCCACGGGAGCGGGC > 1:768851/1‑145 CAACAGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCACGCAGGCCGAAGGGGCCCACGGGAGCGGGC < 2:768851/145‑1 ATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCACGCAGGCCGAAGGGGCCCACGGGAGCGGG < 1:897466/98‑1 ATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCACGCAGGCCGAAGGGGCCCACGGGAGCGGG > 2:897466/1‑98 GGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCACGCATGCCGAAGGGGCCCACGGGAGCGGGCGCGTCCCGCAAT < 1:241064/106‑1 GGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTCACGCATGCCGAAGGGGCCCACGGGAGCGGGCGCGTCCCGCAAT > 2:241064/1‑106 GCTCACGCAGGCCGAAGGGGCCCACGGGAGCGGGCGCGTCCCGCAATGATTCAGGCAATGGGAATTCAGGCGAGCGCCGGCACCACTTCCTT < 2:135941/92‑1 GCTCACGCAGGCCGAAGGGGCCCACGGGAGCGGGCGCGTCCCGCAATGATTCAGGCAATGGGAATTCAGGCGAACGCCGGCACCACTTCCTTGATGAACAGCTCGAGCGACTTCTTCTTCTCGGCGTGGGGCAAGCTGTTGTCGCGCCAG > 1:578917/1‑150 GCTCACGCAGGCCGAAGGGGCCCACGGGAGCGGGCGCGTCCCGCAATGATTCAGGCAATGGGAATTCAGGCGAACGCCGGCACCACTTCCTT > 1:135941/1‑92 TCACGCAGGCCGAACGGGTCCACGGGAGCGGGCGCGTCCCGCAATGACACAGGCGCTGGGAACTAAGGCGAACGCCGGCACCCCTTCCTTGATGAACAGCTCGAGCGACTTCTTCTTCTCGGCGTGGGGCAAGCTGTTGTCGCACCAGAA < 2:78583/150‑1 AGGAACTGGGCGTCGACGAGTTCAGCTTCTGGTGCGACAACAGCTTGCCCCACGCCGAGAAGAAGAAGTCGCTCGAGCTGTTCATCAAGGAAGTGGTGCCGGCGTTCGCCTGAATTCCCATTGCCTGAATCATTGCGGGACGCGCCCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4140040‑4140190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcACGCAGGCCGAAGGGGCCCACGGGAGCGGGCGCGTCCCGCAATGATTCAGGCAATGGGAATTCAGGCGAACGCCGGCACCACTTCCTTGATGAACAGCTCGAGCGACTTCTTCTTCTCGGCGTGGGGCAAGCTGTTGTCGCACCAGAA < NC_002947/4140213‑4140066 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |