| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4150058 | 51 (1.130) | 8 (0.180) | 7/244 | NT | 13.8% | intergenic (+13/‑384) | PP_3654/PP_3655 | leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein |
| ? | NC_002947 | = 4150143 | 50 (1.130) | intergenic (+98/‑299) | PP_3654/PP_3655 | leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein | |||||
CTGCATGTGGTAGCCAAGGACCTGCCGGCGTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4149908‑4150058‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAGGGGCCGGCACAAGAGGAAACAGCTACATGGGGAGCAACCGATCCTGGATCACTTCCTTCATCACCAAGGTCGA < NC_002947/4150143‑4149995 CTGCATGTGGTAGCCAAGGACCTGCCGGCGTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTT < 1:1087213/150‑1CTGCATGTGGTAGCCAAGGACCTGCCGGCGTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTT > 2:578065/1‑150 TGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTAC > 2:1126973/1‑150 CCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTT < 1:114810/92‑1 CCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTT > 2:114810/1‑92 TATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCG < 1:1126973/150‑1 CCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGGTTT > 1:491476/1‑150 GCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGG > 1:224836/1‑129 GCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGG < 2:224836/129‑1 CCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAGGGGCCGGCACAAGA < 2:491476/150‑1 GAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCG > 1:983948/1‑107 GAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCG < 2:983948/107‑1 TGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTCGCAGGCGCGGGTTTACCCGCGAAGGGGCCGGCACAAGAGGAAACAGCTACATGGGGAGCAACCGATCCTGGATCACTTCCTTCATCACCAAGGTCG > 2:529051/1‑150 GGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAGGGGCCGGCACAAGAGGAAACAGCTACATGGGGAGCAACCGATCCTGGATCACTTCCTTCATCACCAAGGTCGA > 2:345807/1‑150 CTGCATGTGGTAGCCAAGGACCTGCCGGCGTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4149908‑4150058‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTGCGACGGGCTACGTCACCTTTGCAGGCGCGGGTTTACCCGCGAAGGGGCCGGCACAAGAGGAAACAGCTACATGGGGAGCAACCGATCCTGGATCACTTCCTTCATCACCAAGGTCGA < NC_002947/4150143‑4149995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |