New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 415005851 (1.130)8 (0.180) 7/244 NT 13.8% intergenic (+13/‑384) PP_3654/PP_3655 leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein
?NC_002947 = 4150143 50 (1.130)intergenic (+98/‑299) PP_3654/PP_3655 leucine‑responsive regulatory protein/cytosine/purine/uracil/thiamine/allantoin permease family protein

TGGTAGCCAAGGACCTGCCGGCGTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGG  >  NC_002947/4149915‑4150207
                                                                                                                                               |                                                                                                                                                     
tgGTAGCCAAGGACCTGCCGGCGTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGCAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTACTCTTGTGcccg                                                                                                                                                 >  2:327571/1‑148 (MQ=255)
              cTGCCGGCGTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTa                                                                                                                                   >  1:674298/1‑150 (MQ=255)
              cTGCCGGCGTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTa                                                                                                                                   >  1:1091246/1‑150 (MQ=255)
                      gTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCt                                                                                                                                            >  2:222422/1‑133 (MQ=255)
                      gTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCt                                                                                                                                            <  1:222422/133‑1 (MQ=255)
                       tttaaGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTTTACCcgcga                                                                                                                          <  1:410683/146‑2 (MQ=255)
                           aGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGc                                                                                                                      >  1:345807/1‑150 (MQ=255)
                                 tGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGt                                                                                                                >  2:36159/1‑150 (MQ=255)
                                   tATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGa                                                                                                              <  1:36159/150‑1 (MQ=255)
                                     tGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGtgccggcctcttcgcgggtaaacccgctcctgcgacgggctac                                                                                                            >  2:1126973‑M1/1‑107 (MQ=255)
                                        cGAGAACCCGACCACTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAg                                                                                                         <  2:936627/150‑1 (MQ=255)
                                         gaccACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTTATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGc                                                                                                        >  1:936627/4‑150 (MQ=255)
                                             aCCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGt                                                                                                    <  2:651073/150‑1 (MQ=255)
                                               cTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGc                                                                                                        >  1:1198414/1‑144 (MQ=255)
                                               cTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGc                                                                                                        <  2:1198414/144‑1 (MQ=255)
                                                     aGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAg                                                                                            >  2:980573/1‑150 (MQ=255)
                                                       tATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGtgccggcctcttcgcgggtaaacccgctcctgcgacgggctacgtcacctttgcaggcgcg                                                                                          <  1:1126973‑M1/150‑62 (MQ=255)
                                                            ccAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGggccggcctcttcgcgggtaaacccgctcctgcgacgggctacgtcacctttgcaggcgcgggttt                                                                                     >  1:491476‑M1/1‑84 (MQ=255)
                                                             cAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCGAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTa                                                                                    >  1:529051/1‑150 (MQ=255)
                                                              aaTGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCggg                                                                                        >  2:643094/1‑145 (MQ=255)
                                                              aaTGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCggg                                                                                        <  1:643094/145‑1 (MQ=255)
                                                              aaTGGGGAACGCTTGAGATCGGCCTTGGTGATGAAGGAAGTGATCCAGGATCGTTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTAc                                                                                   <  2:197510/150‑1 (MQ=255)
                                                               aTGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTAcc                                                                                  <  2:1091246/150‑1 (MQ=255)
                                                                       cGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAaga                                                                          <  1:578065/150‑1 (MQ=255)
                                                                        gCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTcgc                                                                                                                                        >  1:211878/1‑87 (MQ=255)
                                                                        gCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTcgc                                                                                                                                        <  2:211878/87‑1 (MQ=255)
                                                                        gCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAagag                                                                         <  2:674298/150‑1 (MQ=255)
                                                                         cTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAg                                                                                                                  <  2:129204/108‑1 (MQ=255)
                                                                         cTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAg                                                                                                                  >  1:129204/1‑108 (MQ=255)
                                                                            gAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTtgt                                                                                                                                                      <  1:68131/69‑1 (MQ=255)
                                                                            gAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTtgt                                                                                                                                                      >  2:68131/1‑69 (MQ=255)
                                                                              gCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGggccggcctcttcgcgggtaaacccgctcctgcgacgggctacgtcacctttgcaggcgcggg                                                                                        <  2:224836‑M1/129‑64 (MQ=255)
                                                                              gCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGggccggcctcttcgcgggtaaacccgctcctgcgacgggctacgtcacctttgcaggcgcggg                                                                                        >  1:224836‑M1/1‑66 (MQ=255)
                                                                               cTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAggccggcc                                                                  >  2:940530/1‑150 (MQ=255)
                                                                                tCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCc                                                                 >  2:345807‑M2/1‑149 (MQ=255)
                                                                                 cGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCGAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCca                                                                >  2:529051‑M2/1‑148 (MQ=255)
                                                                                  gACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAg                                                               <  1:244755/150‑1 (MQ=255)
                                                                                  gACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAg                                                               <  1:1176513/150‑1 (MQ=255)
                                                                                    ccTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGggccggcctcttcgcgggtaaacccgctcctgcgacgggctacgtcacctttgcaggcgcgggtttacccgcgaaggggccggcacaaga                                                             <  2:491476‑M1/150‑91 (MQ=255)
                                                                                    ccTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCTGGTTGACCCGCGAAGAGGCCGGCCCAGGc                                                             >  2:298112/1‑150 (MQ=255)
                                                                                           gatgaAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGaa                                                                            <  1:1007198/128‑1 (MQ=255)
                                                                                           gatgaAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGaa                                                                            >  2:1007198/1‑128 (MQ=255)
                                                                                            atgaAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAgg                                                                                              >  1:827523/1‑109 (MQ=255)
                                                                                            atgaAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAgg                                                                                              <  2:827523/109‑1 (MQ=255)
                                                                                            atgaAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTc                                                     >  2:1130045/1‑150 (MQ=255)
                                                                                              gaaggaagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTcgc                                                                                                                                        <  1:388425/65‑1 (MQ=255)
                                                                                              gaaggaagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTcgc                                                                                                                                        >  2:388425/1‑65 (MQ=255)
                                                                                                  gaagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGtgccggccccttcgcgggtaaacccgctcctgcgacgggctacgtcacctttgcaggcgcg                                                                                          >  1:983948‑M1/1‑46 (MQ=255)
                                                                                                  gaagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGtgccggccccttcgcgggtaaacccgctcctgcgacgggctacgtcacctttgcaggcgcg                                                                                          <  2:983948‑M1/107‑62 (MQ=255)
                                                                                                  gaagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTc                                                     >  2:1034425/1‑144 (MQ=255)
                                                                                                  gaagTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTc                                                     <  1:1034425/144‑1 (MQ=255)
                                                                                                    agTGATCCAGGATCGGTTGCTCCCCCTGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCAGGAAAACCCGCCACTGCAAAAGTCCCGTGGTCGGTCGCGCGAGCGGGGTGACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCtcctc                                             >  2:1041653/1‑146 (MQ=255)
                                                                                                    agTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGccc                                             <  1:940530/150‑1 (MQ=255)
                                                                                                     gTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCt                                            >  1:702046/1‑150 (MQ=255)
                                                                                                               aTCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACgcgc                                  >  2:945008/1‑150 (MQ=255)
                                                                                                                  ggTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAggccg                                                                     <  2:417505/112‑1 (MQ=255)
                                                                                                                  ggTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAggccg                                                                     >  1:417505/1‑112 (MQ=255)
                                                                                                                   gTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACAt                              >  1:694347/1‑150 (MQ=255)
                                                                                                                    ttGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATc                             <  1:1130045/150‑1 (MQ=255)
                                                                                                                      gCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGc                           <  1:945008/150‑1 (MQ=255)
                                                                                                                       cTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCa                          >  1:575723/1‑150 (MQ=255)
                                                                                                                        tCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCAc                         >  2:966821/1‑150 (MQ=255)
                                                                                                                          cccATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGc                                               >  1:229542/1‑126 (MQ=255)
                                                                                                                          cccATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGc                                               <  2:229542/126‑1 (MQ=255)
                                                                                                                                           tctTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCcaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaagg      <  2:491476‑M2/150‑61 (MQ=255)
                                                                                                                                           tctTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGAt      >  1:1181113/1‑150 (MQ=255)
                                                                                                                                              tGggccggcctcttcgcgggtaaacccgctcctgcgacgggctacgtcaccttcgcaggcgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcg   >  2:529051‑M1/1‑2 (MQ=255)
                                                                                                                                               gggccggcctcttcgcgggtaaacccgctcctgcgacgggctacgtcacctttgcaggcgcgggtttacccgcgaaggggccggcacaagaggaaacagctacatggggagcaaccgatcctggatcacttccttcatcaccaaggtcga  >  2:345807‑M1/1‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                     
TGGTAGCCAAGGACCTGCCGGCGTTTCAGAAGCTGTATGACGAGCACCTGACCAGTATTCCCAATGTGAAACGCTTGAGCTCGACCTTGGTGATGAAGGAAGTGATCCAGGATCGGTTGCTCCCCATGTAGCTGTTTCCTCTTGTGCCGGCCCCTTCGCGGGTAAACCCGCGCCTGCAAAGGTGACGTAGCCCGTCGCAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCAGGCAACCTTTCATCTGCCCTGAAAACGCGCACATCGCACCAACCCAGCCCACCGTGATCCGG  >  NC_002947/4149915‑4150207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.