| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4172981 | 48 (1.060) | 3 (0.070) | 3/242 | NT | 5.8% | coding (571/825 nt) | PP_3671 | aldo/keto reductase family oxidoreductase |
| ? | NC_002947 | = 4173006 | 50 (1.140) | coding (596/825 nt) | PP_3671 | aldo/keto reductase family oxidoreductase | |||||
GGTTACTGCGCCAGGTGGTGGAAACCCTGGGCGCGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4172832‑4172981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTGGATCACCGGCTGCGCCGCTGCCTGGCCGCGTGCCAGCGGGGTGTAGGCGGTGAGCAACAGGTCATGGCCGCGGGCGAAGTCGAGTAGCGGTTGCTGGCTGAGCAGAACATGGTATTCCACCTGAATTGCCGACAACGGCGCGCCCAG < NC_002947/4173006‑4172858 GGTTACTGCGCCAGGTGGTGGAAACCCTGGGCGCGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCC > 1:759153/1‑150 CCTGGGCGCGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGg < 1:792305/124‑2 CCTGGGCGCGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGg > 2:792305/1‑123 CGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCCTGGATCACCGGCTGCGCCGCTGCCTGGCCGCGT < 1:859850/150‑1 CCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCCTGGATCACCGGCTGCGCCGCTGCCTGGCCGC > 1:1001152/1‑75 CCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCCTGGATCACCGGCTGCGCCGCTGCCTGGCCGC < 2:1001152/75‑1 CCTGGATCACCGGCTGCGCCGCTGCCTGGCCGAGTGCCAGCGGGGTGTAGGCGGTGAGCAACAGGTCATGGCCGCGGGCGAAGTCGAGTAGCGGTTGCTGGCTGAGCAGAACATGGTATTCCACCTGAATTGCCGACAACGGCGCGCCCA > 2:350583/1‑150 CTGGATCACCGGCTGCGCCGCTGCCTGGCCGCGTGCCAGCGGGGTGTAGGCGGTGAGCAACAGGTCATGGCCGCGGGCGAAGTCGAGTAGCGGTTGCTGGCTGAGCAGAACATGGTATTCCACCTGAATTGCCGACAACGGCGCGCCCAG < 2:307833/150‑1 GGTTACTGCGCCAGGTGGTGGAAACCCTGGGCGCGCCGTTGTCGGCAATTCAGGTGGAATACCATGTTCTGCTCAGCCAGCAACCGCTACTCGACTTCGCCCGCGGCCATGACCTGTTGCTCACCGCCTACACCCCGCTGGCACGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4172832‑4172981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccTGGATCACCGGCTGCGCCGCTGCCTGGCCGCGTGCCAGCGGGGTGTAGGCGGTGAGCAACAGGTCATGGCCGCGGGCGAAGTCGAGTAGCGGTTGCTGGCTGAGCAGAACATGGTATTCCACCTGAATTGCCGACAACGGCGCGCCCAG < NC_002947/4173006‑4172858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |