| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4459082 = | 53 (1.170) | 4 (0.100) | 4/230 | NT | 7.8% | coding (63/1455 nt) | trkH‑I | potassium transporter |
| ? | NC_002947 | 4459110 = | 46 (1.100) | coding (91/1455 nt) | trkH‑I | potassium transporter | |||||
CATGTCCCTGGTCCGCAGTTGCGGTGTGTCGGGTACGCCGCGGGCCACCATGAGCAGGCCGACACACAGAACGATCAGGCTCGACCAGACGAATGCACCGAGGTCGTCGCTGCGGTCGTACACCAGCAGCGTCAGCATTG‑GAATCACCATGCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4459238‑4459082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgctgacgCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGACACACCGCAACTGCGGACCAGGGACATGTATCTGCTCACGACGGCAAG > NC_002947/4459110‑4459258 CATGTCCCTGGTCCGCAGTTGCGGTGTGTCGGGTACGCCGCGGGCCACCATGAGCAGGCCGACACACAGAACGATCAGGCTCGACCAGACGAATGCACCGAGGTCGTCGCTGCGGTCGTACACCAGCAGCGTCAGCATTG‑GAATCACCAT > 2:99842/1‑150 CCTGGTCCGCAGTTGCGGTGTGTCGGGTACGCCGCGGGCCACCATGAGCAGGCCGACACACAGAACGATCAGGCTCGACCAGACGAATGCACCGAGGTCGTCGCTGCGGTCGTACACCAGCAGCGTCAGCATTG‑GAATCACCATGCTGAC > 1:700870/1‑150 TCGGGTACGCCGCGGGCCACCATGAGCAGGCCGACACACAGAACGATCAGGCTCGACCAGACGAATGCACCGAGGTCGTCGCTGCGGTCGTACACCAGCAGCGTCAGCATTG‑GAATCACCATGCTG > 1:791100/1‑126 TCGGGTACGCCGCGGGCCACCATGAGCAGGCCGACACACAGAACGATCAGGCTCGACCAGACGAATGCACCGAGGTCGTCGCTGCGGTCGTACACCAGCAGCGTCAGCATTG‑GAATCACCATGCTG < 2:791100/126‑1 ACGCCGCGGGCCACCATGAGCAGGCCGACACACAGAACGATCAGGCTCGACCAGACGAATGCACCGAGGTCGTCGCTGCGGTCGTACACCAGCAGCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACG < 1:278883/136‑1 ACGCCGCGGGCCACCATGAGCAGGCCGACACACAGAACGATCAGGCTCGACCAGACGAATGCACCGAGGTCGTCGCTGCGGTCGTACACCAGCAGCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACG > 2:278883/1‑136 GTCAGCATTG‑GAATCACCGTGCTGACGCTGCTGGTGTACGACCGCAGCGAC > 1:1073605/1‑51 GTCAGCATTG‑GAATCACCATGCTGACGCTGCTGGTGTACGACCGCAGCGAC < 2:1073605/51‑1 GCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGACACACCGCAACTGCGGACCAGGGACATGTATCTGCTCACGACGGCAAG < 2:347791/150‑1 GCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTG < 2:27068/85‑1 GCTGCTGGTGTACGACAGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTG > 1:27068/1‑85 CATGTCCCTGGTCCGCAGTTGCGGTGTGTCGGGTACGCCGCGGGCCACCATGAGCAGGCCGACACACAGAACGATCAGGCTCGACCAGACGAATGCACCGAGGTCGTCGCTGCGGTCGTACACCAGCAGCGTCAGCATTG‑GAATCACCATGCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4459238‑4459082‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgctgacgCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGACACACCGCAACTGCGGACCAGGGACATGTATCTGCTCACGACGGCAAG > NC_002947/4459110‑4459258 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |