New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4459082 =	53 (1.170)	4 (0.100)	4/230	NT	7.8%	coding (63/1455 nt)	trkH‑I	potassium transporter
	?	NC_002947	4459110 =	46 (1.100)					coding (91/1455 nt)	trkH‑I	potassium transporter

ATTGCCGGCCACGACTTTACGCCTTTTTTACTCGACATTACCGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGACACACCGCAACTGCGGA  >  NC_002947/4458933‑4459227                                                                                                                                                      |                                                                                                                                                   cttgccgtcgtgagcagatacatgtccctggtccgcagttgcggtgtgtcgggtacgccgcgggccaccatgagcaggccgacacacagaacgatcaggctcgaccagacgaatgcaccgaggtcgtcgctgcggtcgtacaccagcagc                                                                                                                                                    <  2:347791‑M1/1‑1 (MQ=255)           aCGACTTTACGCCTTTTTTACTCGACATTACCGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATgg                                                                                                                                          >  1:781515/1‑150 (MQ=255)                       cTTTTTTACTCGACATTACCGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGc                                                                                                                             >  2:1150943/1‑150 (MQ=255)                        ttttttACTCGACATTACCGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCt                                                                                                                            <  1:1184015/150‑1 (MQ=255)                        ttttttACTCGACATTACCGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCt                                                                                                                            <  1:144018/150‑1 (MQ=255)                                tCGACATTACCGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACgctgc                                                                                                                    >  2:635540/1‑150 (MQ=255)                                tCGACATTACCGTAAAGCAGGCAATACTGCCGGCACTGTCCAAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACgctgc                                                                                                                    >  2:612767/1‑150 (MQ=255)                                  gACATTACCGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGctgctg                                                                                                                  <  1:635540/150‑1 (MQ=255)                                        aCCGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTAc                                                                                                            >  2:700870/1‑150 (MQ=255)                                          cGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGa                                                                                                          >  2:170355/1‑150 (MQ=255)                                                    gCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGcgac                                                                                                <  1:1098672/150‑1 (MQ=255)                                                          cTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTc                                                                                          >  1:199091/1‑150 (MQ=255)                                                           tGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CCATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCg                                                                                         <  1:1150943/150‑1 (MQ=255)                                                           tGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCg                                                                                         <  2:781515/150‑1 (MQ=255)                                                             ccGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGAc                                                                                                                         >  1:432227/1‑116 (MQ=255)                                                             ccGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGAc                                                                                                                         <  2:432227/116‑1 (MQ=255)                                                                  caccatgagcaggccgacacacagaacgatcaggctcgaccagacgaatgcaccgaggtcgtcgctgctgtcgtacaccagcagc                                                                                                                                                    >  1:27068‑M1/85‑85 (MQ=255)                                                                  caccatgagcaggccgacacacagaacgatcaggctcgaccagacgaatgcaccgaggtcgtcgctgcggtcgtacaccagcagc                                                                                                                                                    <  2:27068‑M1/1‑1 (MQ=255)                                                                    tGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCg                                                                                >  2:218636/1‑150 (MQ=255)                                                                    tGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATCATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCGGCGACCACCTCGGTGCAttgg                                                                                >  2:510833/1‑148 (MQ=255)                                                                        ccAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCTTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGCTAGCCGTCAGCATGGTGCTTCGTGCTCCTG‑GACTTCTCCCTGACGACCGCAGCGACGACCTCGGTGCATTCGTCTg                                                                            <  1:510833/150‑1 (MQ=255)                                                                                  cccTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTg                                                                  >  1:260243/1‑150 (MQ=255)                                                                                   ccTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGa                                                                 >  1:1040018/1‑150 (MQ=255)                                                                                            cGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCtgt                                                        <  1:170355/150‑1 (MQ=255)                                                                                                tCCTGCATTGTGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTAAGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTgtgtgt                                                    <  2:61184/150‑1 (MQ=255)                                                                                                 ccTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCtgtg                                                       >  2:121181/1‑146 (MQ=255)                                                                                                 ccTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCtgtg                                                       <  1:121181/146‑1 (MQ=255)                                                                                                 ccTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTc                                                   >  1:347791/1‑150 (MQ=255)                                                                                                    gCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGc                                                <  2:656664/150‑1 (MQ=255)                                                                                                                    ccTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGccc                                <  1:612767/150‑1 (MQ=255)                                                                                                                    ccTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCACTGGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGccc                                >  1:378998/1‑150 (MQ=255)                                                                                                                      ttCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCtgtgt                                                      <  1:552038/126‑1 (MQ=255)                                                                                                                      ttCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCtgtgt                                                      >  2:552038/1‑126 (MQ=255)                                                                                                                      ttCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCtgtgt                                                      >  2:552532/1‑126 (MQ=255)                                                                                                                      ttCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCtgtgt                                                      <  1:552532/126‑1 (MQ=255)                                                                                                                      ttCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCg                                                  <  1:96000/130‑1 (MQ=255)                                                                                                                      ttCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGGTCTGTGTGTCg                                                  >  2:96000/1‑130 (MQ=255)                                                                                                                            attGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGCCCTCGGTGCATTCGTCTGGTCGAGCCTGCTAGTTCTGTGTGTCGGCCTGCTCATGGTGGCTCGCGTCGTa                        <  2:199091/150‑1 (MQ=255)                                                                                                                             ttGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTAc                       <  2:142098/150‑1 (MQ=255)                                                                                                                              gtcgctgcggtcgtacaccagcagCGTCAGCATGGTGATTC‑CAATGCTGAc                                                                                                                         <  2:1073605‑M1/27‑1 (MQ=255)                                                                                                                              gtcgctgcggtcgtacaccagcagCGTCAGCACGGTGATTC‑CAATGCTGAc                                                                                                                         >  1:1073605‑M1/25‑51 (MQ=255)                                                                                                                                gtgtATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCAtg                                       >  2:1159913/1‑131 (MQ=255)                                                                                                                                gtgtATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCAtg                                       <  1:1159913/131‑1 (MQ=255)                                                                                                                                 tgtATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCgcgg                            <  2:49987/141‑1 (MQ=255)                                                                                                                                 tgtATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCgcgg                            >  1:49987/1‑141 (MQ=255)                                                                                                                                 tgtATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGa                   <  2:372379/150‑1 (MQ=255)                                                                                                                                     ttCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGacaca               <  2:390183/150‑1 (MQ=255)                                                                                                                                      tCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATGGTTCTGTCATTACCTCTGCGCATGGTGGCCCGCGGCGTACCCGacacac              >  1:682233/1‑150 (MQ=255)                                                                                                                                        cTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATc                                                               >  2:217701/1‑99 (MQ=255)                                                                                                                                        cTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATc                                                               <  1:217701/99‑1 (MQ=255)                                                                                                                                        cTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTAcc                      >  1:816964/1‑140 (MQ=255)                                                                                                                                        cTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTAcc                      <  2:816964/140‑1 (MQ=255)                                                                                                                                         cgtacaccagcagCGTCAGCATTG‑GAATCACCATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGt                         <  1:278883‑M1/123‑1 (MQ=255)                                                                                                                                         cgtacaccagcagCGTCAGCATTG‑GAATCACCATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGt                         >  2:278883‑M1/14‑136 (MQ=255)                                                                                                                                          gATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGACACACCGCa          >  1:99842/1‑150 (MQ=255)                                                                                                                                              aCGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGACACACCGCAACTg      >  2:630386/1‑150 (MQ=255)                                                                                                                                                gTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTc                                                                                 >  1:870787/1‑73 (MQ=255)                                                                                                                                                gTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTc                                                                                 <  2:870787/73‑1 (MQ=255)                                                                                                                                                gTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGt                                                                          >  1:469214/1‑80 (MQ=255)                                                                                                                                                gTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGt                                                                          <  2:469214/80‑1 (MQ=255)                                                                                                                                                  tGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGACACACCGCAACTGCGGa  <  2:515348/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                   ATTGCCGGCCACGACTTTACGCCTTTTTTACTCGACATTACCGTAAAGCAGGCAATACTGCCGGCACTGTCCCAACGAGCTCCCTCAATGCCGCTTCCTGCATTGCGTTTCATCGCCTTCATTATTGGTGTATTCCTGATCACGTTGGCCGTCAGCATGGTGATTC‑CAATGCTGACGCTGCTGGTGTACGACCGCAGCGACGACCTCGGTGCATTCGTCTGGTCGAGCCTGATCGTTCTGTGTGTCGGCCTGCTCATGGTGGCCCGCGGCGTACCCGACACACCGCAACTGCGGA  >  NC_002947/4458933‑4459227

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.