New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4635686 = | 38 (0.840) | 3 (0.070) | 3/236 | NT | 8.0% | coding (116/639 nt) | uvrY | BarA/UvrY two‑componenent system response regulator |
? | NC_002947 | 4635739 = | 33 (0.770) | coding (63/639 nt) | uvrY | BarA/UvrY two‑componenent system response regulator |
GTGGCGGGATCCAATCGCCCTGCTGACGAGGTGTGTGCTTGATTAGGGTCTTAGTGGTCGATGATCACGATCTGGTACGAACCGGTATTACACGGATGTTGGCCGACATCGACGGCCTGCAGGTGGTGGGTGAGGGAGATTCCGGCGAGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4635839‑4635686 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcCAACATCCGTGTAATACCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGGATCCCGCCACCTTAACAAAATTTTTCACGGTGGGCCTAACGCATTGCTTCCTTC > NC_002947/4635739‑4635883 GTGGCGGGATCCAATCGCCCTGCTGACGAGGTGTGTGCTTGATTAGGGTCTTAGTGGTCGATGATCACGATCTGGTACGAACCGGTATTACACGGATGTTGGCCGACATCGACGGCCTGCAGGTGGTGGGTGAGGGAGATTCCGGCGAGT < 2:909506/150‑1 ATGTTGGCCGACATCGACGGCCTGCAGGTGGTGGGTGAGGGAGATTCCGGCGAGTCGGCCAACATCCGTGTAATACCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGG > 1:1110990/1‑150 CCGACATCGACGGCCTGCAGGTGGTGGGTGAGGGAGATTCCGGCGAGTCGGCCAACATCCGTGTAATACCGGTTCGTACCAGATCGTGATCATCGACCACTAAGA < 1:527887/105‑1 CCGACATCGACGGCCTGCAGGTGGTGGGTGAGGGAGATTCCGGCGAGTCGGCCAACATCCGTGTAATACCGGTTCGTACCAGATCGTGATCATCGACCACTAAGA > 2:527887/1‑105 TCGGCCAACATCCGTGTAATACCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGGATCCCGCCACCTTAACAAAATTTTTCACGGTGGGCCTAACGCATTGCTTCCTTC > 2:732226/1‑150 GTGGCGGGATCCAATCGCCCTGCTGACGAGGTGTGTGCTTGATTAGGGTCTTAGTGGTCGATGATCACGATCTGGTACGAACCGGTATTACACGGATGTTGGCCGACATCGACGGCCTGCAGGTGGTGGGTGAGGGAGATTCCGGCGAGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4635839‑4635686 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcCAACATCCGTGTAATACCGGTTCGTACCAGATCGTGATCATCGACCACTAAGACCCTAATCAAGCACACACCTCGTCAGCAGGGCGATTGGATCCCGCCACCTTAACAAAATTTTTCACGGTGGGCCTAACGCATTGCTTCCTTC > NC_002947/4635739‑4635883 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |