New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5255633	53 (1.170)	3 (0.070)	3/234	NT	5.8%	coding (115/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase
	?	NC_002947	= 5255654	47 (1.100)					coding (136/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase

CCGCTGAGGCCAGGCCATACAACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5255479‑5255633 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcacTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGGGCCAGGGCCAGCCCGACGCGCTGGCTGGCTCCGGTAACGAGAATGGGGCTGTTCATGTTCGGGGTGGTCAACTTGTCTGTCCTTTGGTTGCCACCCAGCATACCCGAAC  <  NC_002947/5255654‑5255511                                                                                                                                                                                                                                                                                                             CCGCTGAGGCCAGGCCATACAACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACT                                                                                                                                                       >  1:908057/1‑150    CTGAGGCCAGGCCATACAACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGC                                                                                                                                                    <  2:386065/150‑1                                   TCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAAC                                                                                                                                                        <  1:240799/115‑1                                   TCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAAC                                                                                                                                                        >  2:240799/1‑115                                         ATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGG                                                                                                               <  2:908057/150‑1                                                                                CCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACTGACCACCGTATGGCCGGCCTGT                                                                                                                           >  1:529828/1‑99                                                                                CCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACTGACCACCGTATGGCCGGCCTGT                                                                                                                           <  2:529828/99‑1                                                                                                                                                      TGGCACTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGGGCCAGGGCCAGCCCGACGCGCTGGCTGGCTCCGGTAACGAGAATGGGGCTGTTCATGTTCGGGGTGGTCAACTTGTCTGTCCTTTGGTTGCCACCCAGCATACCCGAAC  <  1:1080562/150‑1                                                                                                                                                      TGGCACTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGGGCCAGGGCCAGCCCGACGCGCTGGCTGGCTCCGGTAACGAGAATGGGGCTGTTCATGTTCGGGGTGGTCAACTTGTCTGTCCTTT                          <  1:1041511/126‑1                                                                                                                                                      TGGCACTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGGGCCAGGGCCAGCCCGACGCGCTGGCTGGCTCCGGTAACGAGAATGGGGCTGTTCATGTTCGGGGTGGTCAACTTGTCTGTCCTTT                          >  2:1041511/1‑126                                                                                                                                                                                                                                                                                                             CCGCTGAGGCCAGGCCATACAACAGGGAAACAGTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5255479‑5255633 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcacTGACCACCGTATGGCCGGCCTGTGCCAGTTCGAGGGCCAGGGCCAGCCCGACGCGCTGGCTGGCTCCGGTAACGAGAATGGGGCTGTTCATGTTCGGGGTGGTCAACTTGTCTGTCCTTTGGTTGCCACCCAGCATACCCGAAC  <  NC_002947/5255654‑5255511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.