New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5255633	53 (1.170)	3 (0.070)	3/234	NT	5.8%	coding (115/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase
	?	NC_002947	= 5255654	47 (1.100)					coding (136/738 nt)	folM	bifunctional dihydrofolate reductase/dihydromonapterin reductase

GTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGACTACGCGCCATCATCCACAACGCCTC  >  NC_002947/5255511‑5255802                                                                                                                                                |                                                                                                                                                      gTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAgtgcca                                                                                                                                                 <  1:1080562‑M2/150‑7 (MQ=255)             tGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATcc                                                                                                                                     >  2:1121195/1‑150 (MQ=255)                    cAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCgca                                                                                                                              <  1:1121195/150‑1 (MQ=255)                        cAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCgcaggca                                                                                                                          <  2:488447/150‑1 (MQ=255)                         aaaGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAgtgcca                                                                                                                                                 <  1:1041511‑M2/126‑7 (MQ=255)                         aaaGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAgtgcca                                                                                                                                                 >  2:1041511‑M2/1‑120 (MQ=255)                          aaGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGc                                                                                                                        >  1:949703/1‑150 (MQ=255)                           aGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGcc                                                                                                                       >  2:36529/1‑150 (MQ=255)                              acagacaAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCgcagg                                                                                                                            >  1:1142510/1‑142 (MQ=255)                              acagacaAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCgcagg                                                                                                                            <  2:1142510/142‑1 (MQ=255)                                agacaAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCgcaggca                                                                                                                          >  2:720771/1‑142 (MQ=255)                                agacaAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCgcaggca                                                                                                                          <  1:720771/142‑1 (MQ=255)                                  acaAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCa                                                                                                                >  1:1027003/1‑150 (MQ=255)                                          gccaccCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTg                                                                                                        >  2:807564/2‑150 (MQ=255)                                             accCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAg                                                                                                     <  2:949703/150‑1 (MQ=255)                                                ccGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGttt                                                                                                  >  1:1100183/1‑150 (MQ=255)                                                             gCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCtgt                                                                                    <  1:36529/150‑1 (MQ=255)                                                             gCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCtgt                                                                                    <  1:615221/150‑1 (MQ=255)                                                             gCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAAGCCGGCCATACGGCGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCtgt                                                                                    >  1:709288/1‑150 (MQ=255)                                                              ccccATTCTCGTTACCGGAGCCAGCCCGCGCGGCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCgca                                                                                                                                           >  1:337557/1‑95 (MQ=255)                                                              ccccATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCgca                                                                                                                                           <  2:337557/95‑1 (MQ=255)                                                               cccATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGc                                                                                  >  2:703208/1‑150 (MQ=255)                                                               cccATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGACCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCAACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGc                                                                                  >  1:279295/1‑150 (MQ=255)                                                                 cATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCa                                                                                >  1:1034814/1‑150 (MQ=255)                                                                 cATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGGGGTCAGTGCCAGCAGCCGCATCATGTTGCAGGCTGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCa                                                                                >  1:1174466/1‑150 (MQ=255)                                                                    tctcGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAggc                                                                             <  2:1100183/150‑1 (MQ=255)                                                                     ctcGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCAT‑CAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAggcgg                                                                           <  2:573367/150‑1 (MQ=255)                                                                      tcGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAggcgg                                                                           <  1:807564/150‑1 (MQ=255)                                                                        gTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAggcgggc                                                                         >  2:1101190/1‑150 (MQ=255)                                                                              ggAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGc                                                                   <  1:53160/150‑1 (MQ=255)                                                                              ggAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGc                                                                   >  2:509476/1‑150 (MQ=255)                                                                                agccagccAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCa                                                                 <  1:718372/150‑1 (MQ=255)                                                                                 gccagccaGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCTGGCGGTcgcccgcctg                                                                >  2:488084/1‑148 (MQ=255)                                                                                 gccagccaGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAAGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAg                                                                <  2:709288/150‑1 (MQ=255)                                                                                    agccagcGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAACCGCAACATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGgcg                                                             >  1:319970/1‑150 (MQ=255)                                                                                       cagcGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCGG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTg                                                          >  1:119789/1‑150 (MQ=255)                                                                                       cagcGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCTGGCGGTCGCCCGCCTGgcacag                                                          <  1:488084/150‑5 (MQ=255)                                                                                        agcGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTga                                                         <  2:59406/150‑1 (MQ=255)                                                                                         gcgcGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTgat                                                        <  1:954818/150‑1 (MQ=255)                                                                                          cgcgTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGCCCTCGGCGGGCGACCGCCAGGCGCTgatc                                                       <  1:1069034/150‑1 (MQ=255)                                                                                                gggCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCAc                                                 <  1:496429/150‑1 (MQ=255)                                                                                                  gCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAggcgg                                                                           >  1:637877/1‑122 (MQ=255)                                                                                                  gCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAggcgg                                                                           <  2:637877/122‑1 (MQ=255)                                                                                                      gccctggccctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCCACATCGTGCAGTTTCAG‑GACCACCTGTGCCAGGCGCGCGACCGCCAGGCGCTGATCGATCACCTGCAc                                           <  2:1043327/150‑1 (MQ=255)                                                                                                          tggccctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATc                                       <  1:703208/150‑1 (MQ=255)                                                                                                             ccctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGAACTGTGCCAGGTGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGtt                                    <  1:788359/150‑1 (MQ=255)                                                                                                              cctCGAACTGGCACAGGCCGGCCATACGGTGGTCAgtgccagttcgagggccagggccagcccgacgcgctggctggctccggtaacgagaatggggctgttcatgttcggggtggtcaacttgtctgtcctttggttgccacccagcat                                    <  2:908057‑M2/150‑116 (MQ=255)                                                                                                              cctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGACGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTa                                   >  1:1116888/1‑150 (MQ=255)                                                                                                               ctCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTAt                                  >  2:147657/1‑150 (MQ=255)                                                                                                                tCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATg                                 >  2:700852/1‑150 (MQ=255)                                                                                                                          acaGGCCGGCCATACGGTGGTCAgtgccagttcgagggccagggccagcccgacgcgctggctggctccggtaacgagaatggggctgttcatgttcgg                                                                           <  2:529828‑M2/99‑77 (MQ=255)                                                                                                                          acaGGCCGGCCATACGGTGGTCAgtgccagttcgagggccagggccagcccgacgcgctggctggctccggtaacgagaatggggctgttcatgttcgg                                                                           >  1:529828‑M2/1‑23 (MQ=255)                                                                                                                          acaGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGACTAcg                       >  1:1000228/1‑150 (MQ=255)                                                                                                                          acaGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGACTAcg                       >  2:1172947/1‑150 (MQ=255)                                                                                                                                cggcgATACGGTGGTCAATGGCAGTGGCAGCAGCCAGCCGCAGGCAGCCCACCCCCACATCGTGCA‑TACGAGCTTCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGACTACGCGCcat                 <  1:677421/150‑1 (MQ=255)                                                                                                                                               cAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGACTACGCGCCATCATCCACAACGCCTc  <  2:1000228/150‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                      GTTCGGGTATGCTGGGTGGCAACCAAAGGACAGACAAGTTGACCACCCCGAACATGAACAGCCCCATTCTCGTTACCGGAGCCAGCCAGCGCGTCGGGCTGGCCCTGGCCCTCGAACTGGCACAGGCCGGCCATACGGTGGTCAGTGCCAGCCGCAGCATCCAGCCGCAGGCAGCCCACCCCAACATCGTGCAGTTTCAG‑GCCGACCTGTGCCAGGCGGGCGACCGCCAGGCGCTGATCGATCACCTGCACGATCGTTATGACGGACTACGCGCCATCATCCACAACGCCTC  >  NC_002947/5255511‑5255802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.