New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5334493 = | 59 (1.310) | 4 (0.090) | 4/232 | NT | 7.2% | coding (875/2976 nt) | PP_4695 | two‑component system sensor histidine kinase |
? | NC_002947 | 5334532 = | 48 (1.140) | coding (914/2976 nt) | PP_4695 | two‑component system sensor histidine kinase |
GCCAGGGTGGTGACGATGATCAGGCCGCTGGCTGCCGACAGGCCGCCAATGTAGGCCAGCAGTGCCAATGCCTGGTTGTTGGCGGCGATGCCCAGGCCCAGGGTGAAGTACTCGGGGTTGGTGCTGGCGCCCAGGCGCAGGCCGGCCCACAGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5334649‑5334493 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaccaACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGG > NC_002947/5334532‑5334678 GCCAGGGTGGTGACGATGATCAGGCCGCTGGCTGCCGACAGGCCGCCAATGTAGGCCAGCAGTGCCAATGCCTGGTTGTTGGCGGCGATGCCCAGGCCCAGGGTGAAGTACTCGGGGTTGGTGCTGGCGCCCAGGCGCAGGCCGGCCCAC > 2:1037800/1‑150 CCAGGGTGGTGACGATGATCAGGCCGCTGGCTGCCGACAGGCCGCCAATGTAGGCCAGCAGTGCCAATGCCTGGTTGTTGGCGGCGATGCCCAGGCCCAGGGTGAAGTACTCGGGGTTGGTGCTGGCGCCCAGGCGCAGGCCGGCCCACA > 1:541475/1‑150 CAGGGTGGTGACGATGATCAGGCCGCTGGCTGCCGACAGGCCGCCAATGTAGGCCAGCAGTGCCAATGCCTGGGGGTTGGCGGCGATGCCCAGGCCCAGGGTGAAGTACTCGGGGTTGGTGCTGGCGCCCAGGCGCAGGCCGGCCCACAG > 2:1136480/1‑150 GGGTGGTGACGATGATCAGGCCGCTGGCTGCCGACAGGCCGCCAATGTAGGCCAGCAGTGCCAATGCCTGGTTGTTGGCGGCGATGCCCAGGCCCAGGGTGAAGTACTCGGGGTTGGTGCTGGCGCCCAGGCGCAGGCCGGCCCACAGCA > 2:720865/1‑150 GGTGGTGACGATGATCAGGCCGCTGGCTGCCGACAGGCCGCCAATGTAGGCCAGCAGTGCCAATGCCTGGTTGTTGGCGGCGATGCCCAGGCCCAGGGTGAAGTACTCGGGGTTGGTGCTGGCGCCCAGGCGCAGGCCGGCCCACAGCAC > 1:280619/1‑150 GTTGGTGCTGGCGCCCAGGCGCAGGCCGGCCCACAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCAC > 2:255559/1‑150 GTGCTGGCGCCCAGGCGCAGGCCGGCCCACAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGC > 1:508787/1‑132 GTGCTGGCGCCCAGGCGCAGGCCGGCCCACAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGC < 2:508787/132‑1 GGCCGGCCCACAGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGG < 1:255559/150‑1 AGCACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCAC > 1:408273/1‑150 ACCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTG < 2:631325/150‑1 CCAACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGG < 1:686415/150‑1 GCCAGGGTGGTGACGATGATCAGGCCGCTGGCTGCCGACAGGCCGCCAATGTAGGCCAGCAGTGCCAATGCCTGGTTGTTGGCGGCGATGCCCAGGCCCAGGGTGAAGTACTCGGGGTTGGTGCTGGCGCCCAGGCGCAGGCCGGCCCACAGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5334649‑5334493 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaccaACCCCGAGTACTTCACCCTGGGCCTGGGCATCGCCGCCAACAACCAGGCATTGGCACTGCTGGCCTACATTGGCGGCCTGTCGGCAGCCAGCGGCCTGATCATCGTCACCACCCTGGCGCTGTCGGGCATGGCCCTGAACCACCTGG > NC_002947/5334532‑5334678 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |