| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5637532 = | 48 (1.060) | 7 (0.160) | 6/244 | NT | 12.3% | coding (15/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
| ? | NC_002947 | 5637576 = | 53 (1.190) | coding (59/1443 nt) | PP_4949 | TldD/PmbA family peptidase | |||||
AACTCGGCCGTACTGCGCAGCGCAGCAAAGCGCTGGCGCAGCA‑GGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5637579‑5637532‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGA > NC_002947/5637576‑5637723 AACTCGGCCGTACTGCGCAGCGCAGCAAAGCGCTGGCGCAGCA‑GGGCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCA > 1:383251/1‑129AACTCGGCCGTACTGCGCAGCGCAGCAAAGCGCTGGCGCAGCA‑GGGCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCA < 2:383251/129‑1 TCGGCCGTACTGCGCAGCGCAGCAAAGCGCTGGCGCAGCA‑GGGCGAGTTGTTTTCCCTCCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCA > 2:705197/1‑150 GTACTGCGCAGCGCAGCAAAGCGCTGGCGCAGTACGGCCGAGTTGTTTGGCCTGCGCCATTTAAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTG > 2:41681/1‑150 gACTACGCAGCGCAGCAAAGCGCTGGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGCATGAGGGCGCCATGCTCACAGTGC > 2:84827/2‑150 TACTGCGCAGCGCAGCAAAGCGCTGGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGG > 1:693329/1‑132 TACTGCGCAGCGCAGCAAAGCGCTGGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGG < 2:693329/132‑1 gaCGAGTTGGTTTCTCTGCGCCATGTGAAACAGTCGCACAAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCAACCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCTTACGCTGCCACAGCC > 2:1203985/3‑150 CGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCCATGGCGTGGAGGCCTACGCTGCCACCGCCGA < 1:1073093/150‑1 AACTCGGCCGTACTGCGCAGCGCAGCAAAGCGCTGGCGCAGCA‑GGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5637579‑5637532‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGGGTCAATGGCGTGGAGGCCTACGCTGCCACCGCCGA > NC_002947/5637576‑5637723 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |