| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5637532 = | 48 (1.060) | 7 (0.160) | 6/244 | NT | 12.3% | coding (15/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
| ? | NC_002947 | 5637576 = | 53 (1.190) | coding (59/1443 nt) | PP_4949 | TldD/PmbA family peptidase | |||||
GCGTTATTTCCTGACCTGGGAAGTACCGGGCTGCCATAATGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTC > NC_002947/5637384‑5637679 | tcggcggtggcagcgtaggcctccacgccatggacccgcacggtgagcatggcgccctcatcctggctgaagaagggtggttcggcgacgttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcgcagggaaaacaactCg < 1:1073093‑M1/2‑1 (MQ=255)gcgTTATTTCCTGACCTGGGAAGTACCGGGCTGCCATAATGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTGGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAgcg > 2:807829/1‑150 (MQ=255) ggctgtggcagcgtaagcctccacgccattgacccgcacggtgagcatggcgccctcatcctggctgaagaaggttggttcggcgacgttgcggcgaaccgaaagcgccttgtgcgactgtttcacatggcgcagagaaaccaactcgtc > 2:1203985‑M1/147‑148 (MQ=255) tttCCTGACCTGGGAAGTACCGCGCTGCCATAACGAGCTGGCAATGCTCCTCGAACACGACGATACATGCCTCGGCATGCAAGCCGGGTGGTTCTAGGGGGAGCCACCGTGTAGACAGAGAGAAGCGCACGTTCGATTCCACCGCGc‑tgc > 2:42560/1‑150 (MQ=255) ccTGACCTGGGAAGTCCCGGGCTGCCGTAATGAGCTAGCAATGGTCGGGGCGCCAGCCTTCATCTGCCTCTGCATGCAAGACGGGTGGTGCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑tgctgc < 2:1167496/150‑1 (MQ=255) gggAAGTACCGGGCTGCCATAATGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAgcgc > 1:321540/1‑150 (MQ=255) tACCGGGCTGCCATAATGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTtgct > 2:368913/1‑150 (MQ=255) tAATGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTa < 2:321540/150‑1 (MQ=255) gcactgtgagcatggcgccctcatgctggctgaagaagggtggttcggcgacgttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcgcagggaaaacaactCGGCCGTACTGCGCCAGCGCTTTGCTGCGCTGCGTAgtc > 2:84827‑M1/112‑149 (MQ=255) aaTGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTAc < 1:433666/150‑1 (MQ=255) cacggtgagcatggcgccctcatcctggctgaagaagggtggttcggcgacgttgcggcgaaccgaaagcgcctggtgcgactgttttaaatggcgcaggccaaacaactCGGCCGTACTGCGCCAGCGCTTTGCTGCGCTGCGCAGTAc > 2:41681‑M1/111‑150 (MQ=255) tGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCTTGGCGGTGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGCACgg > 1:616816/1‑150 (MQ=255) tgagcatggcgccctcatcctggctgaagaagggtggttcggcgacgttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcggagggaaaacaactCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGa > 2:705197‑M1/106‑150 (MQ=255) cTGGCATTGCTCGAGGCACACGACGATACCTGCATCGGCATGCAACAAGGGTGGTTACACAGGAAGCCCCCTAGCAGAAGGAATCATCCGCATGTTCGATTCCATCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGa > 2:136514/1‑150 (MQ=255) tGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAg > 1:1120704/1‑150 (MQ=255) gCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAgtt > 1:9459/1‑150 (MQ=255) gCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGtttt < 1:213197/150‑1 (MQ=255) cTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTc > 2:996853/1‑150 (MQ=255) tCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATACGCCTGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTcc > 1:1046667/1‑150 (MQ=255) gAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGCGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCt > 1:9984/1‑150 (MQ=255) cctcatcctggctgaagaagggtggttcggcgacgttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcgcagggaaaacaactCGGCCGTACTGCGCCAGCGCTTTGCTGCGCTGCGCAGTa > 1:693329‑M1/94‑132 (MQ=255) cctcatcctggctgaagaagggtggttcggcgacgttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcgcagggaaaacaactCGGCCGTACTGCGCCAGCGCTTTGCTGCGCTGCGCAGTa < 2:693329‑M1/39‑1 (MQ=255) ggCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTgc > 1:923419/1‑150 (MQ=255) acacGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGcc > 1:1132691/1‑150 (MQ=255) tgaagaagggtggttcggcgacgttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcgcagggaaaacaactCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAgtt < 2:383251‑M1/48‑1 (MQ=255) tgaagaagggtggttcggcgacgttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcgcagggaaaacaactCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAgtt > 1:383251‑M1/82‑129 (MQ=255) gaTACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGaa > 2:144717/1‑150 (MQ=255) aCCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACa > 2:1141974/1‑150 (MQ=255) tCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCgggg > 1:226904/1‑147 (MQ=255) gCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTa > 1:340781/1‑106 (MQ=255) gCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTa < 2:340781/106‑1 (MQ=255) aaGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCtt > 1:762485/1‑150 (MQ=255) aaGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTCAAACGCCGTCTCCATGTGAAACAGTCGCACCAGGCGCtt > 2:401386/1‑150 (MQ=255) gACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTc > 1:853444/1‑150 (MQ=255) gACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTc < 2:9459/150‑1 (MQ=255) cTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCa > 1:656766/1‑150 (MQ=255) atgcctccGTGTACACGGTGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAg < 1:744172/118‑1 (MQ=255) atgCCTCCGTGTACACGGTGGCATCCGCATGGTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAg > 2:744172/3‑124 (MQ=255) gCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCg < 2:853444/150‑1 (MQ=255) aCCGTGTACACGGAGGCATCCGCATGTTCGATTCCACCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAac < 1:368913/150‑1 (MQ=255) ccGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGctgcgctgcg > 2:436607/1‑69 (MQ=255) ccGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGctgcgctgcg < 1:436607/69‑1 (MQ=255) gtgtACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAaccac > 2:1086571/1‑150 (MQ=255) cacGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCt > 1:1171992/1‑86 (MQ=255) cacGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCt < 2:1171992/86‑1 (MQ=255) cacGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTCCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCcttc > 2:696483/1‑150 (MQ=255) ggAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTc > 2:981671/1‑101 (MQ=255) ggAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTc < 1:981671/101‑1 (MQ=255) aTCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGc > 1:844250/1‑147 (MQ=255) aTCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGc < 2:844250/147‑1 (MQ=255) aTCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAg > 2:227797/1‑150 (MQ=255) tCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGgc < 1:515734/103‑1 (MQ=255) tCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGgc > 2:515734/1‑103 (MQ=255) cATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGa > 2:223211/1‑150 (MQ=255) tGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAgg < 2:1120704/150‑1 (MQ=255) gTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGATTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAggg > 1:627835/1‑150 (MQ=255) cGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGgcgc > 2:345943/1‑150 (MQ=255) tttCCAGCGTCC‑TGCTGCGCCAGCGTTTTGCTGCGCTGCGCATTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCa < 2:9984/149‑1 (MQ=255) cAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAac > 2:488522/1‑116 (MQ=255) cAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAac < 1:488522/116‑1 (MQ=255) cAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCt > 2:1073093/1‑150 (MQ=255) aGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTc > 1:3868/1‑150 (MQ=255) | GCGTTATTTCCTGACCTGGGAAGTACCGGGCTGCCATAATGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCC‑TGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTC > NC_002947/5637384‑5637679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |