| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5649651 = | 56 (1.240) | 5 (0.120) | 5/238 | NT | 8.6% | coding (1593/2127 nt) | PP_4959 | diguanylate cyclase |
| ? | NC_002947 | 5649679 = | 53 (1.220) | coding (1565/2127 nt) | PP_4959 | diguanylate cyclase | |||||
GCGTGGTTTCGAGGCCTTGCTGCGCTGGCAGCACCCCAGCGTTGGCGATGTGCCGCCGGGGCTGTTCATCCCGTTGCTGGAAGAAGCACGGCTGATCAACCGCCTGGCCAGCTGGATCTACCGCCAGGGG‑GCCGCCCAGCGGCAGG‑‑‑CCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5649801‑5649651‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGAC > NC_002947/5649679‑5649824 GCGTGGTTTCGAGGCCTTGCTGCGCTGGCAGCACCCCAGCGTTGGCGATGTGCCGCCGGGGCTGTTCATCCCGTTGCTGGAAGAAGCACGGCTGATCAACCGCCTGGCCAGCTGGATCTACCGCCAGGGG‑GCCGCCCAGCGGCAGG‑‑‑CCTG > 1:791928/1‑150GCGTGGTTTCGAGGCCTTGCTGCGCTGGCAGCACCCCAGCGTTGGCGATGTGCCGCCGGGGCTGTTCATCCCGTTGCTGGAAGAAGCACGGCTGATCAACCGCCTGGCCAGCTGGATCTACCGCCAGGGG‑GCCGCCCAGCGGCAGG‑‑‑CCTG > 1:791952/1‑150 GGCAGCACCCCAGCGTTGGCGATGTGCCGCCGGGGCTGTTCATCCCGTTGCTGGAAGAAGCACGGCTGATCAACCGCCTGGCCAACTGGATCTACCGCCAGGCCTGCCGCTGGGCGGC‑CC‑‑‑CCTGGCGGTAGATCCAGCTGGCCAGGCGGT < 2:119801/150‑1 CCCAGCGTTGGCGATGTGCCGCCGGGGCTGTTCATCCCGTTGCTGGAAGAAGCACGGCTGATCAACCGCCTGGCCAGCTGGATCTACCGCCAGGGG‑GCCGCCCAGCGGCAGG‑‑‑C < 1:244121/113‑1 CCCAGCGTTGGCGATGTGCCGCCGGGGCTGTTCATCCCGTTGCTGGAAGAAGCACGGCTGATCAACCGCCTGGCCAGCTGGATCTACCGCCAGGGG‑GCCGCCCAGCGGCAGG‑‑‑C > 2:244121/1‑113 GATCTACCGCCAGGGG‑GCCGCCCAGCGGCAGG‑‑‑CCTGGCGGTAGATCCAGTTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTC < 1:119801/150‑1 TCTACCGCCAGGGG‑GCCGCCCAGCGGCAGG‑‑‑CCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGA > 1:1070380/1‑93 TCTACCGCCAGGGG‑GCCGCCCAGCGGCAGG‑‑‑CCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGA < 2:1070380/93‑1 GGG‑GCCGCCCAGCGGCAGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGC > 2:108860/1‑150 CCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGA < 1:732393/150‑1 CTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCCGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGAC > 1:385339/1‑150 CTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGAC > 1:497059/1‑150 GCGTGGTTTCGAGGCCTTGCTGCGCTGGCAGCACCCCAGCGTTGGCGATGTGCCGCCGGGGCTGTTCATCCCGTTGCTGGAAGAAGCACGGCTGATCAACCGCCTGGCCAGCTGGATCTACCGCCAGGGG‑GCCGCCCAGCGGCAGG‑‑‑CCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5649801‑5649651‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAACCACGCAGGCGGCCATCGTGGAAGGCGAC > NC_002947/5649679‑5649824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |