New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5649651 =56 (1.240)5 (0.120) 5/238 NT 8.6% coding (1593/2127 nt) PP_4959 diguanylate cyclase
?NC_002947 5649679 = 53 (1.220)coding (1565/2127 nt) PP_4959 diguanylate cyclase

GTTTCCGCCACTTCCACCTCCAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAA  >  NC_002947/5649505‑5649795
                                                                                                                                                  |                                                                                                                                                    
gtcgccttccacgatggccgcctgcgtggtttcgaggccttgctgcgctggcagcaccccagcgttggcgatgtgccgccggggctgttcatcccgttgctggaagaagcacggctgatcaaccgcctggccagctggatctaccgCCAg                                                                                                                                                   >  1:497059‑M1/147‑150 (MQ=255)
gtcgccttccacgatggccgcctgcgtggtttcgaggccttgcggcgctggcagcaccccagcgttggcgatgtgccgccggggctgttcatcccgttgctggaagaagcacggctgatcaaccgcctggccagctggatctaccgCCAg                                                                                                                                                   >  1:385339‑M1/147‑150 (MQ=255)
 tttCCGCCACTTCCACCTCCAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAgg                                                                                                                                                  >  2:932472/1‑150 (MQ=255)
 tttCCGCCACTTCCACCTCCAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAgg                                                                                                                                                  >  1:657449/1‑150 (MQ=255)
 tcgccttccacgatggccgcctgcgtggtttcgaggccttgctgcgctggcagcaccccagcgttggcgatgtgccgccggggctgttcatcccgttgctggaagaagcacggctgatcaaccgcctggccagctggatctaccgCCAgg                                                                                                                                                  <  1:732393‑M1/5‑1 (MQ=255)
     cGCCACTTCCACCTCCAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTg                                                                                                                                           >  2:971079/1‑150 (MQ=255)
     cGCCACTTCCACCTCCAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTg                                                                                                                                           >  1:1108803/1‑150 (MQ=255)
      gCCACTTCCACCTCCAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGc                                                                                                                                          >  1:477062/1‑150 (MQ=255)
         acgtCCACCTCCAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCAGc                                                                                                                                       >  1:387681/4‑150 (MQ=255)
            tCCACCTCCAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTgg                                                                                                                                    <  1:622328/150‑1 (MQ=255)
                   ccAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGccc                                                                                                                            >  2:907658/1‑150 (MQ=255)
                       gcgtggtttcgaggccttgctgcgctggcagcaccccagcgttggcgatgtgccgccggggctgttcatcccgttgctggaagaagcacggctgatcaaccgcctggccagctggatctaccgCCAGGGGGCCTGCCGCTGGGCGGcccc                                                                                                                           >  2:108860‑M1/124‑150 (MQ=255)
                             cGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTa                                                                                                                  <  2:1033702/150‑1 (MQ=255)
                               ggACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTAc                                                                                                                                                      <  2:1021185/116‑1 (MQ=255)
                               ggACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTAc                                                                                                                                                      >  1:1021185/1‑116 (MQ=255)
                               ggACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGa                                                                                                                <  2:214847/150‑1 (MQ=255)
                               ggACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGa                                                                                                                <  1:174255/150‑1 (MQ=255)
                                gACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGAt                                                                                                               >  2:268162/1‑150 (MQ=255)
                                gACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGAt                                                                                                               >  2:732322/1‑150 (MQ=255)
                                 gaggccttgctgcgctggcagcaccccagcgttggcgatgtgccgccggggctgttcatcccgttgctggaagaagcacggctgatcaaccgcctggccaactggatctaccgCCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATc                                                                                                              <  1:119801‑M1/37‑1 (MQ=255)
                                         gTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGc                                                                                                      >  2:282112/1‑150 (MQ=255)
                                          tAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGcc                                                                                                     >  1:673390/1‑150 (MQ=255)
                                                  gATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGtt                                                                                             >  1:219390/1‑150 (MQ=255)
                                                  gATGACCCGTTGCAGCTCTTCGACCAGGCACGGCACGCCGACCTGCCACCCGATGATGCTGATGCCGAGCGCAGGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGGAGATCCAGCTGGCCAGGCGGtt                                                                                             >  1:209709/1‑150 (MQ=255)
                                                  gATGACCCGTTACAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGtt                                                                                             >  2:624058/1‑150 (MQ=255)
                                                   aTGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTg                                                                                            <  1:268162/150‑1 (MQ=255)
                                                     gACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTgg                                                                                                                       <  1:404551/121‑1 (MQ=255)
                                                     gACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTgg                                                                                                                       >  2:404551/1‑121 (MQ=255)
                                                       cccGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTgg                                                                                                                                    >  2:912415/1‑107 (MQ=255)
                                                       cccGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTgg                                                                                                                                    <  1:912415/107‑1 (MQ=255)
                                                       cccGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCa                                                                                        <  2:1108803/150‑1 (MQ=255)
                                                        ccGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAg                                                                                       >  2:936098/1‑150 (MQ=255)
                                                                gCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGctt                                                                               >  2:470281/1‑150 (MQ=255)
                                                                      cGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCa                                                                         <  1:282112/150‑1 (MQ=255)
                                                                       gACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCCGATGGCTAGCCGCTTGTTCACCCGCGcttgctccgg                                                                        >  2:559481/1‑143 (MQ=255)
                                                                       gACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAg                                                                        <  1:470281/150‑1 (MQ=255)
                                                                        aCCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATc                                                                                                              >  2:1166850/1‑111 (MQ=255)
                                                                        aCCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATc                                                                                                              <  1:1166850/111‑1 (MQ=255)
                                                                        aCCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGc                                                                       >  2:1111146/1‑150 (MQ=255)
                                                                                  gcATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGa                                                             >  2:26617/1‑150 (MQ=255)
                                                                                        tcatcccgttgctggaagaagcacggctgatcaaccgcctggccagctggatctaccgCCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGa                                                                                                                <  2:1070380‑M1/35‑1 (MQ=255)
                                                                                        tcatcccgttgctggaagaagcacggctgatcaaccgcctggccagctggatctaccgCCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGa                                                                                                                >  1:1070380‑M1/59‑93 (MQ=255)
                                                                                        cGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGcc                                                       <  1:932472/150‑1 (MQ=255)
                                                                                                  gcgGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGt                                                                                              <  1:1141883/101‑1 (MQ=255)
                                                                                                  gcgGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGt                                                                                              >  2:1141883/1‑101 (MQ=255)
                                                                                                           gCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGc                                                                                 <  2:1194677/105‑1 (MQ=255)
                                                                                                           gCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGc                                                                                 >  1:1194677/1‑105 (MQ=255)
                                                                                                           gCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAAc                                    >  2:791952/1‑150 (MQ=255)
                                                                                                           gCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAAc                                    >  2:791928/1‑150 (MQ=255)
                                                                                                             tGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGc                                  >  2:1092872/1‑150 (MQ=255)
                                                                                                             tGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGc                                  >  2:761829/1‑150 (MQ=255)
                                                                                                               aTGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTg                                <  2:444767/150‑1 (MQ=255)
                                                                                                               aTGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTg                                <  1:907658/150‑1 (MQ=255)
                                                                                                                 gCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTggg                              <  2:219390/150‑1 (MQ=255)
                                                                                                                  ccGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTgggg                             <  1:1092872/150‑1 (MQ=255)
                                                                                                                      gCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGtgct                         <  2:477062/150‑1 (MQ=255)
                                                                                                                         accgcctggccagctggatctaccgCCAGG‑‑‑GGGCCGCCCAGCGGCAGGCCTGGCGGTAGATCCAGTTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGcc                      <  2:119801‑M1/125‑1 (MQ=255)
                                                                                                                          aaGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCa                     <  1:936098/150‑1 (MQ=255)
                                                                                                                            ggTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAgc                   <  1:480101/150‑1 (MQ=255)
                                                                                                                             gTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAgcg                  >  2:732393/1‑150 (MQ=255)
                                                                                                                              tCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAgcgc                 >  1:848007/1‑150 (MQ=255)
                                                                                                                                cggcggAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACgg                                                                  <  2:783414/99‑1 (MQ=255)
                                                                                                                                cggcggAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACgg                                                                  >  1:783414/1‑99 (MQ=255)
                                                                                                                                   cggAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCaa            <  2:657449/150‑1 (MQ=255)
                                                                                                                                     gAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAgg          <  2:673390/150‑1 (MQ=255)
                                                                                                                                      aaaCCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGc         <  1:1111146/150‑1 (MQ=255)
                                                                                                                                      aaaCCGGTCGTACCAGG‑‑‑CCGGCCGCTGCGCGGCCCCCTGGCGGCAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGCGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGc         <  1:559481/150‑1 (MQ=255)
                                                                                                                                         ccGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTc      >  1:498783/1‑150 (MQ=255)
                                                                                                                                             tCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGaaa  <  1:624058/150‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GTTTCCGCCACTTCCACCTCCAACTGCGTCGGGACAAGCTGGTAAAGCTGGATGACCCGTTGCAGCTCTTCGACCAGGCCAGGCATGACGAACTGCGCGCGGCTCAGGCTGATGCCGAGCACAAGGTCCGGCGGAAACCGGTCGTACCAGG‑‑‑CCTGCCGCTGGGCGGCCCCCTGGCGGTAGATCCAGCTGGCCAGGCGGTTGATCAGCCGTGCTTCTTCCAGCAACGGGATGAACAGCCCCGGCGGCACATCGCCAACGCTGGGGTGCTGCCAGCGCAGCAAGGCCTCGAAA  >  NC_002947/5649505‑5649795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.