| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5697474 = | 53 (1.170) | 5 (0.120) | 4/238 | NT | 9.2% | coding (52/1344 nt) | hslU | protease HslVU ATPase subunit |
| ? | NC_002947 | 5697504 = | 48 (1.110) | coding (82/1344 nt) | hslU | protease HslVU ATPase subunit | |||||
ATCAGGATGTTTTTGGGGGTGACTTCGGCACGCAGCTCGGCAGGGAGCTGCATGCGCCGCCAGCGGTTGCGCAGGGCAATGGCCACGGCGCGCTTGGCGTCGTCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5697583‑5697474‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGT > NC_002947/5697504‑5697651 ATCAGGATGTTTTTGGGGGTGACTTCGGCACGCAGCTCGGCAGGGAGCTGCATGCGCCGCCAGCGGTTGCGCAGGGCAATGGCCACGGCGCGCTTGGCGTCGTCCT > 1:155096/1‑106ATCAGGATGTTTTTGGGGGTGACTTCGGCACGCAGCTCGGCAGGGAGCTGCATGCGCCGCCAGCGGTTGCGCAGGGCAATGGCCACGGCGCGCTTGGCGTCGTCCT < 2:155096/106‑1 GCAGGGCAATGGCCACGGCGCGCTTGGCGTCGTCCTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCG < 1:324935/149‑1 GCAGGGCAATGGCCACGGCGCGCTTGGCGTCGTCCTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCG > 2:324935/1‑149 GCAGGGCAATGGCCACGGCGCGCTTGGCGTCGTCCTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTACCG‑AGCCAGGCCCCAAGAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGA > 2:337189/1‑150 AATGGCCACGGCGCGCTTGGCGTCGTCCTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGC > 1:1185205/1‑67 AATGGCCACGGCGCGCTTGGCGTCGTCCTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGC < 2:1185205/67‑1 CCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTCGCCACACTGGCCAACGCGACGT > 2:374485/1‑150 ATCAGGATGTTTTTGGGGGTGACTTCGGCACGCAGCTCGGCAGGGAGCTGCATGCGCCGCCAGCGGTTGCGCAGGGCAATGGCCACGGCGCGCTTGGCGTCGTCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5697583‑5697474‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGT > NC_002947/5697504‑5697651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |