| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5697474 = | 53 (1.170) | 5 (0.120) | 4/238 | NT | 9.2% | coding (52/1344 nt) | hslU | protease HslVU ATPase subunit |
| ? | NC_002947 | 5697504 = | 48 (1.110) | coding (82/1344 nt) | hslU | protease HslVU ATPase subunit | |||||
GGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGT > NC_002947/5697359‑5697651 | ggCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGc < 1:903780/150‑1 (MQ=255) gcgcCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGCGGCCATTGcc > 2:662378/1‑150 (MQ=255) gcgcCCCTTC‑CCGGTGAAGGGGCTGTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTTCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGcc > 1:226712/1‑150 (MQ=255) gcCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCt > 1:45589/1‑150 (MQ=255) ccccTTCACCGG‑GAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTg > 1:183836/1‑150 (MQ=255) tcggtcttgccgacgccggtagggccgatcatcaggatgttcttggggcctggctcggtacgcagctcggcagggagctgcatgcgccgccagcggttgcgcagggcaatGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTgc > 2:337189‑M1/111‑150 (MQ=255) cggtcttgccgacgccggtagggccgatcatcaggatgtttttgggggtgacttcggcacgcagctcggcagggagctgcatgcgccgccagcggttgcgcagggcaatGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTgc < 1:324935‑M1/40‑1 (MQ=255) cggtcttgccgacgccggtagggccgatcatcaggatgtttttgggggtgacttcggcacgcagctcggcagggagctgcatgcgccgccagcggttgcgcagggcaatGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTgc > 2:324935‑M1/110‑149 (MQ=255) ttC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCCCCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCa > 1:1189133/1‑150 (MQ=255) c‑ccGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAAc > 1:959717/1‑150 (MQ=255) ggTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGc < 1:438957/150‑1 (MQ=255) gCTTGTCCACGCGGACTCACCTGCGCAACGACCGTATGGATCAGGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGgcgc > 2:15737/1‑150 (MQ=255) ccACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAg > 2:403923/1‑150 (MQ=255) tcTGACTCACCTGCCCAAGTACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAGCCGCCACATCATCGCCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTcc < 2:640761/149‑1 (MQ=255) cACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGa < 2:28270/150‑1 (MQ=255) aCCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATg < 1:201057/135‑1 (MQ=255) aCCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATg > 2:201057/1‑135 (MQ=255) aCCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAg > 1:130184/1‑150 (MQ=255) tGCCCAAGGACCGTATTGATCATGTCCATGCCCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTg < 1:619348/150‑1 (MQ=255) gCCCAAGGACCGTATTGATCATGTCCATGCCCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGc < 1:436249/150‑1 (MQ=255) cAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTg < 2:183836/150‑1 (MQ=255) aaGGACCGTATTGATCAGGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGc < 1:1200201/150‑1 (MQ=255) aCCGTATTGATCATGTCCACGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGaa < 2:794266/150‑1 (MQ=255) ttGATCATGTCCATGACCCCCCGCGAGATCGTCCACGCACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑cc < 2:1189133/150‑1 (MQ=255) tCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCa > 2:226228/1‑150 (MQ=255) tCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCa > 2:935358/1‑150 (MQ=255) tGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCaaaa < 2:1065898/150‑1 (MQ=255) cATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACAt > 2:90276/1‑150 (MQ=255) cATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACAt > 1:490392/1‑150 (MQ=255) aTGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGGGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATc < 2:45589/150‑1 (MQ=255) gACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCACCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCt < 1:15737/150‑1 (MQ=255) cccccGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCtgat < 1:561315/150‑1 (MQ=255) cccGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCtgatga > 1:1038274/1‑150 (MQ=255) ccGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTgatgat > 2:869348/1‑150 (MQ=255) ccGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTgatgat < 1:869348/150‑1 (MQ=255) gctgcatgcgccgccagcggttgcgcagggcaatGGCCAGGACGACGCCAAGCGCGCCGTGGCCAtt < 2:1185205‑M1/33‑1 (MQ=255) gctgcatgcgccgccagcggttgcgcagggcaatGGCCAGGACGACGCCAAGCGCGCCGTGGCCAtt > 1:1185205‑M1/35‑67 (MQ=255) agaTCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGcc < 1:1201055/150‑1 (MQ=255) cGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGt < 1:1163697/150‑1 (MQ=255) gAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACACCCTGATGATCGGCCCTACCGGCGTc < 1:630876/150‑1 (MQ=255) gAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCAATTGCCATGCACCACCGCTGGCGGCGCATGCAGCACCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTc < 2:226712/150‑1 (MQ=255) aaCCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCGCTACCGGCGTCGGCAAg > 1:1155003/1‑150 (MQ=255) aCCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGa < 1:403923/150‑1 (MQ=255) gcagggcaatggccacggcgcgcttggcgtcgtcctggccATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCg > 2:324935‑M2/41‑149 (MQ=255) gcagggcaatggccacggcgcgcttggcgtcgtcctggccATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCg < 1:324935‑M2/109‑1 (MQ=255) gcagggcaatggccacggcgcgcttggcgtcgtcctggccATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTACCG‑AGCCAGGCCCCAAGAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGa > 2:337189‑M2/41‑150 (MQ=255) ccACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCATGATGATCGGCCCTACCGGCGTCGGCAAGACCGa > 2:755341/1‑150 (MQ=255) cacaTCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGaa < 2:959717/150‑1 (MQ=255) acaTCATCGGCCAGGACGACGCCAAGCGCGCCGCGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGaaa < 1:662378/150‑1 (MQ=255) atcatcGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATc > 1:307018/1‑150 (MQ=255) atcatcGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATc > 1:736360/1‑150 (MQ=255) atcatcGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCATACCGGCGTCGGCAAGACCGAAATc > 1:1010408/1‑150 (MQ=255) aatggccacggcgcgcttggcgtcgtcctggccATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGc < 2:1185205‑M2/34‑1 (MQ=255) aatggccacggcgcgcttggcgtcgtcctggccATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGc > 1:1185205‑M2/34‑67 (MQ=255) AGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCtgat < 2:155096‑M1/106‑1 (MQ=255) AGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCtgat > 1:155096‑M1/1‑106 (MQ=255) acgacgCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATc > 1:310023/1‑98 (MQ=255) acgacgCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATc < 2:310023/98‑1 (MQ=255) gacgCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGcc > 1:115461/1‑150 (MQ=255) cAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACt > 2:849877/1‑150 (MQ=255) gcgcgcCGTGGCCATTGCCCTGCGCAACCGCTCGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCACAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGc < 2:130184/150‑1 (MQ=255) ccATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTCGCCACACTGGCCAACGCGACGt > 2:374485‑M2/3‑150 (MQ=255) | GGCGCCCCTTC‑CCGGTGAAGGGGCTTTTCCACGCTGACTCACCTGCCCAAGGACCGTATTGATCATGTCCATGACCCCCCGCGAGATCGTCCACGAACTCAACCGCCACATCATCGGCCAGGACGACGCCAAGCGCGCCGTGGCCATTGCCCTGCGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCA‑CCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGT > NC_002947/5697359‑5697651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |