| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5701854 = | 54 (1.200) | 5 (0.120) | 4/234 | NT | 9.4% | coding (534/852 nt) | phaB | poly(3‑hydroxyalkanoate) depolymerase |
| ? | NC_002947 | 5701880 = | 45 (1.060) | coding (560/852 nt) | phaB | poly(3‑hydroxyalkanoate) depolymerase | |||||
GCATGTTGATCAGCGGGATCAACGGGTCGTCGTCGCCAGCCAGTACCAGGGTGGGCTGCCGGATCTTGTGCAGCCAGTGGATGCTGGTCCAGCCGAGCCCTGCGAACAGCTGCCAGTAGTAGCCCAGCTTGCCGCCGGAGCGCACCTTGGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5702008‑5701854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcaAGCTGGGCTACTACTGGCAGCTGTTCGCAGGGCTCGGCTGGACCAGCATCCACTGGCTGCACAAGATCCGGCAGCCCACCCTGGTACTGGCTGGCGACGACGACCCGTTGATCCCGCTGATCAACATGCGCCTGCTGGCCTGGCGGATT > NC_002947/5701880‑5702028 GCATGTTGATCAGCGGGATCAACGGGTCGTCGTCGCCAGCCAGTACCAGGGTGGGCTGCCGGATCTTGTGCAGCCAGTGGATGCTGGTCCAGCCGAGCCCTGCGAACAGCTGCCAGTAGTAGCCCAGCTTGCCGCCGGAGCGCACCTTGG > 2:80245/1‑150 TCAGCGGGATCAACGGGTCGTCGTCGCCAGCCAGTACCAGGGTGGGCTGCCGGATCTTGTGCAGCCAGTGGATGCTGGTCCAGCCGAGCCCTGCGAACAGCTGCCAGTAGTAGCCCAGCTTGCCGCCGGAGCGCACCTTGGC > 1:1027980/1‑142 TCAGCGGGATCAACGGGTCGTCGTCGCCAGCCAGTACCAGGGTGGGCTGCCGGATCTTGTGCAGCCAGTGGATGCTGGTCCAGCCGAGCCCTGCGAACAGCTGCCAGTAGTAGCCCAGCTTGCCGCCGGAGCGCACCTTGGC > 1:426347/1‑142 TCAGCGGGATCAACGGGTCGTCGTCGCCAGCCAGTACCAGGGTGGGCTGCCGGATCTTGTGCAGCCAGTGGATGCTGGTCCAGCCGAGCCCTGCGAACAGCTGCCAGTAGTAGCCCAGCTTGCCGCCGGAGCGCACCTTGGC < 2:1027980/142‑1 TCAGCGGGATCAACGGGTCGTCGTCGCCAGCCAGTACCAGGGTGGGCTGCCGGATCTTGTGCAGCCAGTGGATGCTGGTCCAGCCGAGCCCTGCGAACAGCTGCCAGTAGTAGCCCAGCTTGCCGCCGGAGCGCACCTTGGC < 2:426347/142‑1 CCAGCTTGCCGCCGGAGCGCACCTTGGCGGCAAGCTGGGCTACTACTGGCAGCTGTTCGCAGGGCTCGGCTGGACCAGCATCCACTGGCTGCACAAGATCCGGCAGCCCACCCTGGTACTGGCTGGCGACGACGACCCGTTGATCCCGCT > 1:1112820/1‑150 CCAGCTTGCCGCCGGAGCGCACCTTGGCGGCAAGCTGGGCTACTACTGGCAGCTGTTCGCAGGGCTCGGCTGGACCAGCATCCACTGGCTGCAC < 1:225934/94‑1 CCAGCTTGCCGCCGGAGCGCACCTTGGCGGCAAGCTGGGCTACTACTGGCAGCTGTTCGCAGGGCTCGGCTGGACCAGCATCCACTGGCTGCAC > 2:225934/1‑94 AGCTTGCCGCCGGAGCGCACCTTGGCGGCAAGCTGGGCTACTACTGGCAGCTGTTCGCAGGGCTCGGCTGGACCAGCATCCACTGGCT > 1:775385/1‑88 AGCTTGCCGCCGGAGCGCACCTTGGCGGCAAGCTGGGCTACTACTGGCAGCTGTTCGCAGGGCTCGGCTGGACCAGCATCCACTGGCT < 2:775385/88‑1 GGCAAGCTGGGCTACTACTGGCAGCTGTTCGCAGGGCTCGGCTGGACCAGCATCCACTGGCTGCACAAGATCCGGCAGCCCACCCTGGTACTGGCTGGCGACGACGACCCGTTGATCCCGCTGATCAACATGCGCCTGCTGGCCTGGCGG > 1:1118563/1‑150 AAGCTGGGCTACTACTGGCAGCTGTTCGCAGGGCTCGGCTGGACCAGCATCCACTGGCTGCACAAGATCCGGCAGCCCACCCTGGTACTGGCTGGCGACGACGACCCGTTGATCCCGCTGATCAACATGCGCCTGCTGGCCTGGCGGATT > 2:831036/1‑150 GCATGTTGATCAGCGGGATCAACGGGTCGTCGTCGCCAGCCAGTACCAGGGTGGGCTGCCGGATCTTGTGCAGCCAGTGGATGCTGGTCCAGCCGAGCCCTGCGAACAGCTGCCAGTAGTAGCCCAGCTTGCCGCCGGAGCGCACCTTGGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5702008‑5701854‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcaAGCTGGGCTACTACTGGCAGCTGTTCGCAGGGCTCGGCTGGACCAGCATCCACTGGCTGCACAAGATCCGGCAGCCCACCCTGGTACTGGCTGGCGACGACGACCCGTTGATCCCGCTGATCAACATGCGCCTGCTGGCCTGGCGGATT > NC_002947/5701880‑5702028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |