New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6071678 = | 63 (1.400) | 4 (0.090) | 4/236 | NT | 6.1% | intergenic (‑45/+57) | phoU/pstB‑II | phosphate transport‑associated protein/phosphate ABC transporter ATP‑binding protein |
? | NC_002947 | 6071727 = | 64 (1.490) | intergenic (‑94/+8) | phoU/pstB‑II | phosphate transport‑associated protein/phosphate ABC transporter ATP‑binding protein |
CACCGGTCGCTACGGCTAAGCGCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6071753‑6071678 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGACCAGTTTGCCCATGTACATGAACGCGGTGTAATCCGAAACACGCGCCGCTTGCTGCAT > NC_002947/6071727‑6071875 CACCGGTCGCTACGGCTAAGCGCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGC > 1:1144170/1‑75 CACCGGTCGCTACGGCTAAGCGCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGC < 2:1144170/75‑1 GCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTA < 1:1111602/133‑1 GCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTA > 2:1111602/1‑133 TCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGCCCAGTTTtc > 1:845715/1‑148 GAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGACCAGTTTGCCCAT > 2:360034/1‑150 GAGTGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGACCAGTTTGCCCATGTACATGAACGCGGTGTAATCCGAAACACGCGCCGCTTGCTGCAT < 2:1111351/150‑1 GAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGACCAGTTTGCCCATGTACATGAACGCGGTGTAATCCGAAACACGCGCCGCTTGCTGCAT < 1:360034/150‑1 CACCGGTCGCTACGGCTAAGCGCCGCTCGCGAAACAGGCACCTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6071753‑6071678 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAGGGTATCGGTATCCCCGAATTCGACCAGTTTGCCCATGTACATGAACGCGGTGTAATCCGAAACACGCGCCGCTTGCTGCAT > NC_002947/6071727‑6071875 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |