| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 6157155 | 38 (0.840) | 4 (0.090) | 4/236 | NT | 9.3% | coding (539/1068 nt) | PP_5400 | hypothetical protein |
| ? | NC_002947 | = 6157195 | 42 (0.980) | coding (579/1068 nt) | PP_5400 | hypothetical protein | |||||
ATCCCCTTTCCACAAGACCCGTTGCAGTTCCGGAACGAGATTCTTGGAACAGAAGGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCCAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6157001‑6157155‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagatA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAGGTACGCCATGGCGCCAACATGCTTGCAGCAGATTCCGCAGGCCTAACCAATTCCCACCTTCTGT < NC_002947/6157195‑6157049 ATCCCCTTTCCACAAGAGCCGTTGCAGTCCCGGAACGAGATTCTTCGAACAGAACGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGGGTGCGAAGGACGACCC > 2:801626/1‑150ATCCCCTTTCCACAAGACCCGTTGCAGTTCCGGAACGAGATTCTTGGAACAGAAGGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCC > 2:455035/1‑150ATCCCCTTTCCACAAGACCCGTTGCAGTTCCGGAACGAGATTCTTGGAACAGAAGGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCC > 1:793808/1‑150 TCCCCTTTCCACAAGACCCGTTGCAGTTCCGGAACGAGATTCTTGGAACAGAAGGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGGGCGAAGGACTACCCA > 2:1102076/1‑150 AGACCCGTTGCAGTTCCGGAACGAGATTCTTGGAACAGAAGGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCC < 1:1067382/136‑1 AGACCCGTTGCAGTTCCGGAACGAGATTCTTGGAACAGAAGGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCC > 2:1067382/1‑136 TTGGAACAGAAGGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCCAAGATGGATGACAGGTCGCCCTTCGAACATGGTGACCATGCCA < 1:49352/150‑1 ACAGAAGGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCCAAGATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATC < 2:1133194/150‑1 TCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCCAAGATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGG < 2:976280/123‑1 TCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCCAAGATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGG > 1:976280/1‑123 AAGATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAGGTACGCCATGGCGCCAACATGCTTGCAGCAGATTCCGCAGGCCTAACCAATTCCCACCTTCT > 1:455035/1‑150 AAGATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAGGTACGCCATGGCGCCAACATGCTTGCAGCAGATTCCGCAGGCCTAACCAATTCCCACCTTCT > 2:189035/1‑150 GATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAGGTACGCCATGGCGCCAACATGCTTGCAGCAGATTCCGCAGGCCTAACCAATTCCCACCTTCTGT > 1:195707/1‑150 GATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAGGTACGCCATGGCGCCAACATGCTTGCAGCAGATTCCGCAGGCCTAACCAATTCCCACCTTCTGT > 1:1102076/1‑150 GATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAGGTACGCCATGGCGCCAACATGCTTGCAGCAGATTC > 2:322342/1‑121 GATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAGGTACGCCATGGCGCCAACATGCTTGCAGCAGATTC < 1:322342/121‑1 GATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAG > 1:417746/1‑86 GATA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAG < 2:417746/86‑1 ATCCCCTTTCCACAAGACCCGTTGCAGTTCCGGAACGAGATTCTTGGAACAGAAGGTGGGAATTGGTTAGGCCTGCGGAATCTGCTGCAAGCATGTTGGCGCCATGGCGTACCTGTGATCTATCTGGACGAGGTGTGCGAAGGACTACCCAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/6157001‑6157155‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagatA‑ATGACAGGTCGCCCTTCGAACATGGTGACCATGCCATCCATCTTGGGTAGTCCTTCGCACACCTCGTCCAGATAGATCACAGGTACGCCATGGCGCCAACATGCTTGCAGCAGATTCCGCAGGCCTAACCAATTCCCACCTTCTGT < NC_002947/6157195‑6157049 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |