New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 235331 =51 (1.130)17 (0.430) 8/216 NT 28.0% intergenic (+28/+97) PP_0183/argH glutathione S‑transferase/argininosuccinate lyase
?NC_002947 235390 = 43 (1.090)intergenic (+87/+38) PP_0183/argH glutathione S‑transferase/argininosuccinate lyase

CCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTG  >  NC_002947/235183‑235478
                                                                                                                                                    |                                                                                                                                                    
cccGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGc                                                                                                                                                     <  2:281530/150‑1 (MQ=255)
 ccGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGcc                                                                                                                                                    >  2:911305/1‑150 (MQ=255)
  cGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGccc                                                                                                                                                   >  2:175972/1‑150 (MQ=255)
   tgacgctggaaggctcggtgcatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCg                                                                                                                                                  <  1:630540‑M1/5‑1 (MQ=255)
    gacgctggaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGc                                                                                                                                                 <  1:1017530‑M1/6‑1 (MQ=255)
      cgctggaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCcgcgc                                                                                                                                               >  1:948260‑M1/143‑148 (MQ=255)
        ctggaaggctcggtgaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTccc                                                                                                                                             >  2:662733‑M1/141‑150 (MQ=255)
          aaGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCcac                                                                                                                                           >  2:924605/1‑150 (MQ=255)
               gtgtggttaatgcgcgtgaccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTc                                                                                                                                      <  2:301306‑M1/17‑1 (MQ=255)
                          tGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGtttt                                                                                                                          <  1:924605/150‑1 (MQ=255)
                               ggggAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGTAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGaaa                                                                                                                     <  1:687606/150‑1 (MQ=255)
                               ggggAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGaaa                                                                                                                     <  1:310395/150‑1 (MQ=255)
                                 ggAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACt                                                                                                                   <  2:361147/150‑1 (MQ=255)
                                  ccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCcaca                                                                                                                                          <  2:610084‑M1/13‑1 (MQ=255)
                                  ccacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCcaca                                                                                                                                          >  1:610084‑M1/115‑127 (MQ=255)
                                   cacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt                                                                                                                  >  2:630540‑M1/114‑150 (MQ=255)
                                   cacattggtggtacggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt                                                                                                                  >  2:613380‑M1/114‑150 (MQ=255)
                                   agaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTtg                                                                                                                 >  2:1101335/1‑150 (MQ=255)
                                    gaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTTTGCACCGTTTTTGAAACTtgt                                                                                                                >  1:1024371/1‑150 (MQ=255)
                                    gaACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTtgt                                                                                                                <  2:210623/150‑1 (MQ=255)
                                        ccGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCTGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCAt                                                                                                            >  1:1037436/1‑150 (MQ=255)
                                           cacaTGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCTGGCATGCCCGCTCCCACAGGTCTTCACCGTTTTTGAAACTTGTGCATTAc                                                                                                         <  1:284871/150‑1 (MQ=255)
                                                gCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCtgtg                                                                                                    <  2:696080/150‑1 (MQ=255)
                                                gCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCtgtg                                                                                                    <  1:1101335/150‑1 (MQ=255)
                                                 ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                                   <  2:869227‑M1/51‑1 (MQ=255)
                                                 ggcgccggcgcaggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTgg                                                                                                   >  1:869227‑M1/100‑150 (MQ=255)
                                                   gcgGATCTTGGCGTACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGaaa                                                                                                                     >  2:1127655/1‑130 (MQ=255)
                                                   gcgGATCTTGGCGTACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGaaa                                                                                                                     <  1:1127655/130‑1 (MQ=255)
                                                   gcgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCa                                                                                                                                 <  2:166470/118‑1 (MQ=255)
                                                   gcgGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCa                                                                                                                                 >  1:166470/1‑118 (MQ=255)
                                                            aggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCAtt                                                                                                           >  2:985176‑M1/89‑131 (MQ=255)
                                                            aggtgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCAtt                                                                                                           <  1:985176‑M1/43‑1 (MQ=255)
                                                             gCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGc                                                                                       >  2:595943/1‑150 (MQ=255)
                                                               tgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTg                                                                                        >  1:994215‑M1/86‑147 (MQ=255)
                                                               tgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTg                                                                                        <  2:994215‑M1/62‑1 (MQ=255)
                                                                   aaGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGATGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACAGCTTTTGAAACTTGTGGATTACCTGTGGGAGCGGGCGTGCCCGGGa                                                                                 >  2:1179439/1‑150 (MQ=38)
                                                                    aGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGaa                                                                                >  1:594514/1‑150 (MQ=255)
                                                                     ggAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc                                                                               >  2:1146003/1‑150 (MQ=255)
                                                                      gAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATg                                                                                                                                                      >  1:747383/1‑79 (MQ=255)
                                                                      gAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATg                                                                                                                                                      <  2:747383/79‑1 (MQ=255)
                                                                         gCGTCGATGCCGACCTACACAGCGATGTACCGGATTGCCTAGCGCGAAGTTTTTTGTTTAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAgg                                                                           <  2:1037436/150‑1 (MQ=21)
                                                                          ggcgttcgtggcaaggccctgttggcgtctcgctaatcccccaagtcgaggccttcgccctcgttcgcgggcacGCCCGCTCCCACATGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg                                                                          >  1:301306‑M1/75‑150 (MQ=255)
                                                                          cGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg                                                                          >  1:934263/1‑150 (MQ=255)
                                                                            tCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCg                                                                        <  1:911305/150‑1 (MQ=255)
                                                                              gATGCCGGCCTTCAGGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTCTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGaa                                                                      <  1:1179439/150‑1 (MQ=255)
                                                                               tcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTAc                                                                                                         <  1:809187‑M1/45‑1 (MQ=255)
                                                                               tcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTAc                                                                                                         >  2:809187‑M1/70‑114 (MQ=255)
                                                                                tGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTGCGCGGGCATGCTTGCTCCCACAGGTCTACACCGTTTTTGAAACTTGTGCAGTACCTGTTGGGGCGGGCGTGCCCGCGAACGAGGGCGAAGc                                                                    >  1:421777/1‑150 (MQ=255)
                                                                                   cGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCt                                                                 >  1:1149681/1‑150 (MQ=255)
                                                                                   cGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCACCAGCCGATAGTTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGGGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCt                                                                 <  2:585883/150‑1 (MQ=255)
                                                                                           aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg                                                         <  1:1146003/150‑1 (MQ=255)
                                                                                           aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg                                                         >  1:147322/1‑150 (MQ=255)
                                                                                           aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg                                                         <  1:175972/150‑1 (MQ=255)
                                                                                            tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTCGGAGCCGGCGTGCACGCGAACGAGGGCGAAGCCCTCGCCTTggg                                                        <  1:214355/150‑1 (MQ=255)
                                                                                                   gatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGGTTAg                                                 >  1:898349/1‑150 (MQ=255)
                                                                                                     tCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCg                                               <  2:931450/150‑1 (MQ=255)
                                                                                                       tcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTAc                                                                                                         >  1:485672‑M1/46‑90 (MQ=255)
                                                                                                       tcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTAc                                                                                                         <  2:485672‑M1/45‑1 (MQ=255)
                                                                                                        gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTc                                                                                                                                      <  2:202496/61‑1 (MQ=255)
                                                                                                        gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTc                                                                                                                                      >  1:202496/1‑61 (MQ=255)
                                                                                                        gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCACTTCTCGGGCATGCCCGCTCCCACAGGTCTGCACCGGAGGTGGAACTTGTGATGAATTTGTTGGGGCGTGCGTGCCCGCGAACGAGGGCGAAGACCTCGCCTTGGAGGTTTAGCgaga                                            >  1:990549/1‑150 (MQ=255)
                                                                                                         gctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt                                                                                                                  <  1:567412‑M1/37‑1 (MQ=255)
                                                                                                         gctaatcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt                                                                                                                  >  2:567412‑M1/44‑80 (MQ=255)
                                                                                                           gCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTTCTACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGc                                         <  1:265620/150‑1 (MQ=255)
                                                                                                             ggCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCa                                       <  2:1049100/150‑1 (MQ=255)
                                                                                                             atcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt                                                                                                                  >  2:507508‑M1/40‑76 (MQ=255)
                                                                                                             atcccccaaggcgagggcttcgccctcgttcgcgggcacGCCCGCTCCCACAGGTAATGCACCGTTTTTGAAACtt                                                                                                                  <  1:507508‑M1/37‑1 (MQ=255)
                                                                                                              gCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCga                                              <  2:561434/142‑1 (MQ=255)
                                                                                                              gCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCga                                              >  1:561434/1‑142 (MQ=255)
                                                                                                                     cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGATGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGcc                               <  1:595943/150‑1 (MQ=255)
                                                                                                                     cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc                                                <  1:225762/133‑1 (MQ=255)
                                                                                                                     cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc                                                >  2:225762/1‑133 (MQ=255)
                                                                                                                          tCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc                          >  2:820791/1‑150 (MQ=255)
                                                                                                                           cTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCa                         <  1:434718/150‑1 (MQ=255)
                                                                                                                               tgtTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCacgaa                     <  2:934263/150‑1 (MQ=255)
                                                                                                                                 ttGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc                          <  2:244403/143‑1 (MQ=255)
                                                                                                                                 ttGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc                          >  1:244403/1‑143 (MQ=255)
                                                                                                                                   gAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac                 <  2:147322/150‑1 (MQ=255)
                                                                                                                                    aGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgacg                >  2:664979/1‑150 (MQ=255)
                                                                                                                                          tCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgcagca          <  2:921457/150‑1 (MQ=255)
                                                                                                                                                  aTGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTg  >  2:179716/1‑150 (MQ=255)
                                                                                                                                                  aTGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTg  >  2:154832/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCCGCAGGCCAAGGCGTTGCTGCAACTGATGGGGGAGAACCCGCACATGCCGCGGATCTTGGCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTG  >  NC_002947/235183‑235478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.