New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 235331 =51 (1.130)17 (0.430) 8/216 NT 28.0% intergenic (+28/+97) PP_0183/argH glutathione S‑transferase/argininosuccinate lyase
?NC_002947 235390 = 43 (1.090)intergenic (+87/+38) PP_0183/argH glutathione S‑transferase/argininosuccinate lyase

GCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCA  >  NC_002947/235244‑235534
                                                                                                                                                  |                                                                                                                                                
gCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGc                                                                                                                                               >  2:595943/1‑150 (MQ=255)
  tgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTg                                                                                                                                                <  2:994215‑M1/62‑1 (MQ=255)
  tgcgtgctgccgtcgttcgtggcaaggccctgttggcgtctcgctaatcccccaaggcgagggcttcgccctcgttcgcgggcatGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTg                                                                                                                                                >  1:994215‑M1/86‑147 (MQ=255)
      aaGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGATGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACAGCTTTTGAAACTTGTGGATTACCTGTGGGAGCGGGCGTGCCCGGGa                                                                                                                                         >  2:1179439/1‑150 (MQ=38)
       aGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGaa                                                                                                                                        >  1:594514/1‑150 (MQ=255)
        ggAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAAc                                                                                                                                       >  2:1146003/1‑150 (MQ=255)
            gCGTCGATGCCGACCTACACAGCGATGTACCGGATTGCCTAGCGCGAAGTTTTTTGTTTAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAgg                                                                                                                                   <  2:1037436/150‑1 (MQ=21)
             ggcgttcgtggcaaggccctgttggcgtctcgctaatcccccaagtcgaggccttcgccctcgttcgcgggcacGCCCGCTCCCACATGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg                                                                                                                                  >  1:301306‑M1/75‑150 (MQ=255)
             cGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAggg                                                                                                                                  >  1:934263/1‑150 (MQ=255)
               tCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCg                                                                                                                                <  1:911305/150‑1 (MQ=255)
                 gATGCCGGCCTTCAGGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTCTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGaa                                                                                                                              <  1:1179439/150‑1 (MQ=255)
                   tGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTGCGCGGGCATGCTTGCTCCCACAGGTCTACACCGTTTTTGAAACTTGTGCAGTACCTGTTGGGGCGGGCGTGCCCGCGAACGAGGGCGAAGc                                                                                                                            >  1:421777/1‑150 (MQ=255)
                      cGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCt                                                                                                                         >  1:1149681/1‑150 (MQ=255)
                      cGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCACCAGCCGATAGTTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGGGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCt                                                                                                                         <  2:585883/150‑1 (MQ=255)
                              aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg                                                                                                                 >  1:147322/1‑150 (MQ=255)
                              aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg                                                                                                                 <  1:1146003/150‑1 (MQ=255)
                              aTGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg                                                                                                                 <  1:175972/150‑1 (MQ=255)
                               tGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTCGGAGCCGGCGTGCACGCGAACGAGGGCGAAGCCCTCGCCTTggg                                                                                                                <  1:214355/150‑1 (MQ=255)
                                      gatCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGGTTAg                                                                                                         >  1:898349/1‑150 (MQ=255)
                                        tCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCg                                                                                                       <  2:931450/150‑1 (MQ=255)
                                           gCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCACTTCTCGGGCATGCCCGCTCCCACAGGTCTGCACCGGAGGTGGAACTTGTGATGAATTTGTTGGGGCGTGCGTGCCCGCGAACGAGGGCGAAGACCTCGCCTTGGAGGTTTAGCgaga                                                                                                    >  1:990549/1‑150 (MQ=255)
                                              gCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTTCTACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGc                                                                                                 <  1:265620/150‑1 (MQ=255)
                                                ggCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCa                                                                                               <  2:1049100/150‑1 (MQ=255)
                                                 gCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCga                                                                                                      <  2:561434/142‑1 (MQ=255)
                                                 gCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCga                                                                                                      >  1:561434/1‑142 (MQ=255)
                                                        cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGATGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGcc                                                                                       <  1:595943/150‑1 (MQ=255)
                                                        cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc                                                                                                        >  2:225762/1‑133 (MQ=255)
                                                        cTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc                                                                                                        <  1:225762/133‑1 (MQ=255)
                                                             tCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc                                                                                  >  2:820791/1‑150 (MQ=255)
                                                              cTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCa                                                                                 <  1:434718/150‑1 (MQ=255)
                                                                  tgtTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCacgaa                                                                             <  2:934263/150‑1 (MQ=255)
                                                                    ttGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc                                                                                  >  1:244403/1‑143 (MQ=255)
                                                                    ttGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGcc                                                                                  <  2:244403/143‑1 (MQ=255)
                                                                      gAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgac                                                                         <  2:147322/150‑1 (MQ=255)
                                                                      ccctcgttcgcgggcacgcccgctcccacaggtaatgcacaagtttcaaaaacggtgcagacatgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGGCCTCGACTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGccacgaacgcc                                                                         >  1:301306‑M2/77‑148 (MQ=255)
                                                                       aGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAacgacg                                                                        >  2:664979/1‑150 (MQ=255)
                                                                             tCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGgcagca                                                                  <  2:921457/150‑1 (MQ=255)
                                                                                    cacgcccgctcccacaggtaatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAgcacgca                                                              >  1:994215‑M2/63‑147 (MQ=255)
                                                                                    cacgcccgctcccacaggtaatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAgcacgca                                                              <  2:994215‑M2/85‑1 (MQ=255)
                                                                                     aTGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTg                                                          >  2:179716/1‑150 (MQ=255)
                                                                                     aTGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTg                                                          >  2:154832/1‑150 (MQ=255)
                                                                                        CCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGCGGGCCAACGCTGGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgc                                                       <  2:296413‑M1/150‑1 (MQ=255)
                                                                                          CGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccg                                                     <  1:1050329‑M1/150‑1 (MQ=255)
                                                                                               ccacaggtaatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcgcc                                                >  1:869227‑M2/52‑150 (MQ=255)
                                                                                               ccacaggtaatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcgcc                                                <  2:869227‑M2/99‑1 (MQ=255)
                                                                                               CCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg                                                                                                                 <  1:267121‑M1/85‑1 (MQ=255)
                                                                                               CCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTgg                                                                                                                 >  2:267121‑M1/1‑85 (MQ=255)
                                                                                               CCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGcc                                                                                       <  2:480058‑M1/111‑1 (MQ=255)
                                                                                               CCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGcc                                                                                       >  1:480058‑M1/1‑111 (MQ=255)
                                                                                               CCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcgcc                                                <  1:540041‑M1/150‑1 (MQ=255)
                                                                                                CACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTgcgccggcgccg                                               <  1:482990‑M1/150‑1 (MQ=255)
                                                                                                   AGGTTTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTac                                            >  2:1024371‑M1/1‑150 (MQ=255)
                                                                                                    GGTCTGCACCGTTTTTGATACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTacc                                           >  1:664979‑M1/1‑150 (MQ=255)
                                                                                                     gtaatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCga                                                                                                      >  1:485672‑M2/46‑90 (MQ=255)
                                                                                                     gtaatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCga                                                                                                      <  2:485672‑M2/45‑1 (MQ=255)
                                                                                                     gtaatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCacga                                                                              >  2:809187‑M2/46‑114 (MQ=255)
                                                                                                     gtaatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCacga                                                                              <  1:809187‑M2/69‑1 (MQ=255)
                                                                                                      TCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTaccac                                         <  2:847392‑M1/150‑1 (MQ=255)
                                                                                                       aatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCt                                                           >  2:985176‑M2/44‑131 (MQ=255)
                                                                                                       aatgcacaagtttcaaaaacggtgcagacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCt                                                           <  1:985176‑M2/88‑1 (MQ=255)
                                                                                                        tGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTAccacca                                       >  2:1017530/1‑150 (MQ=255)
                                                                                                          cACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAt                                     <  1:179716/150‑1 (MQ=255)
                                                                                                          cACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAt                                     >  2:986517/1‑150 (MQ=255)
                                                                                                          cACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACAACCAAt                                     <  1:479123/150‑1 (MQ=255)
                                                                                                           aCCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAg                                                                                           >  2:367960/1‑95 (MQ=255)
                                                                                                           aCCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAg                                                                                           <  1:367960/95‑1 (MQ=255)
                                                                                                             cGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAtgtg                                  <  2:482990/150‑1 (MQ=255)
                                                                                                             aagtttcaaaaacggtgcattacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGAt                                                                                                            >  2:507508‑M2/38‑76 (MQ=255)
                                                                                                             aagtttcaaaaacggtgcattacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGAt                                                                                                            <  1:507508‑M2/39‑1 (MQ=255)
                                                                                                             aagtttcaaaaacggtgcattacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc                                                                                                        >  2:567412‑M2/38‑80 (MQ=255)
                                                                                                             aagtttcaaaaacggtgcattacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGc                                                                                                        <  1:567412‑M2/43‑1 (MQ=255)
                                                                                                             aagtttcaaaaacggtgcattacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAtgtg                                  >  2:613380‑M2/38‑150 (MQ=255)
                                                                                                             aagtttcaaaaacggtgcattacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAtgtg                                  >  2:630540‑M2/38‑150 (MQ=255)
                                                                                                              gTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTgg                                 <  1:296407/150‑1 (MQ=255)
                                                                                                                           gtgCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCa                    >  1:283864/1‑150 (MQ=255)
                                                                                                                              cATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCAtt                      >  1:1158716/1‑145 (MQ=255)
                                                                                                                              cATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCAtt                      <  2:1158716/145‑1 (MQ=255)
                                                                                                                               aTTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGa                <  1:820791/150‑1 (MQ=255)
                                                                                                                                 gacctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCAttaaccacac              <  2:301306‑M2/133‑5 (MQ=255)
                                                                                                                                     tgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTgg                                 <  2:610084‑M2/114‑1 (MQ=255)
                                                                                                                                     tgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTgg                                 >  1:610084‑M2/14‑127 (MQ=255)
                                                                                                                                        gggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAg       >  2:662733‑M2/11‑150 (MQ=255)
                                                                                                                                          gcgcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCg     >  1:948260‑M2/9‑150 (MQ=255)
                                                                                                                                            gcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTc   <  1:1017530‑M2/144‑1 (MQ=255)
                                                                                                                                             cgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATGCACCGAGCCTTCCAGCGTCa  <  1:630540‑M2/145‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
GCGGACAAGGAAGCGTCGATGCCGGCCTTCATGGAGATGATCCGCAGCGGCAAGCGCTGAGTCTGGTGTTGAGCCCTTCGCGGGCATGCCCGCTCCCACAGGTCTGCACCGTTTTTGAAACTTGTGCATTACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCA  >  NC_002947/235244‑235534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.