New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1335055	47 (1.040)	4 (0.090)	4/242	NT	9.0%	coding (224/990 nt)	PP_1160	asparaginase family protein
	?	NC_002947	= 1335089	35 (0.790)					coding (258/990 nt)	PP_1160	asparaginase family protein

TCGGGGATGGTGTGACGCCAAGCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGT  >  NC_002947/1334908‑1335203                                                                                                                                                    |                                                                                                                                                     tCGGGGATGGTGTGACGCCAAGCCTGCATTGCGACCAGGTCCTTGATGAGGGGCCACAATTGCGCGAAATAGCTCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCAt                                                                                                                                                    <  1:569917/150‑1 (MQ=255)               aCGCCAAGCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAg                                                                                                                                      <  1:660329/150‑1 (MQ=255)               aCGCCAAGCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTACCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAg                                                                                                                                      <  2:364781/150‑1 (MQ=255)                 gCCAAGCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGt                                                                                                                                    >  2:658526/1‑150 (MQ=255)                  ccAAGCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCAt                                                                                                                                                    <  2:784133/133‑1 (MQ=255)                  ccAAGCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCAt                                                                                                                                                    >  1:784133/1‑133 (MQ=255)                    aaGCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGa                                                                                                                                 <  2:763254/150‑1 (MQ=255)                    aaGCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGa                                                                                                                                 <  2:913545/150‑1 (MQ=255)                      gCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAgc                                                                                                                               >  2:1096615/1‑150 (MQ=255)                         tGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGcgcg                                                                                                                            >  1:805444/1‑150 (MQ=255)                          ggATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGTGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCgg                                                                                                                           <  2:1073066/150‑1 (MQ=255)                           gATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCggg                                                                                                                          <  2:743309/150‑1 (MQ=255)                           gATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCggg                                                                                                                          <  2:612465/150‑1 (MQ=255)                           gATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCggg                                                                                                                          <  1:382228/150‑1 (MQ=255)                                tgAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCa                                                                                                                     <  1:1096615/150‑1 (MQ=255)                                      gCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCtt                                                                                                               <  1:388639/150‑1 (MQ=255)                                       cAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTg                                                                                                              <  2:1057924/150‑1 (MQ=255)                                       cAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTg                                                                                                              <  1:170073/150‑1 (MQ=255)                                              ttCAGGTTCCACAATTGCGCGAAATGGCGCAGTTTAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGa                                                                                                       <  1:208381/150‑1 (MQ=255)                                                cAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATAGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGc                                                                                                     <  1:75229/150‑1 (MQ=255)                                                   gTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCaa                                                                                                  >  1:583313/1‑150 (MQ=255)                                                      ccACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAggg                                                                                               >  1:525702/1‑150 (MQ=255)                                                                 cgAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGGGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCt                                                                                    >  2:1114011/1‑150 (MQ=255)                                                                  gAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCtt                                                                                   >  2:602673/1‑150 (MQ=255)                                                                   aaaTGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTg                                                                                  <  2:525702/150‑1 (MQ=255)                                                                     aTGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTgaa                                                                                <  2:222555/150‑1 (MQ=255)                                                                       ggCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTg                                                                                                              <  2:921567/118‑1 (MQ=255)                                                                       ggCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTg                                                                                                              >  1:921567/1‑118 (MQ=255)                                                                              ttGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGcc                                                                       <  1:658526/150‑1 (MQ=255)                                                                                         ttCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGa                                                            >  2:721075/1‑150 (MQ=255)                                                                                            aTTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGcc                                                                                                    >  1:809610/1‑107 (MQ=255)                                                                                            aTTGTCCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGcc                                                                                                    <  2:809610/107‑1 (MQ=255)                                                                                                tgCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGctc                                                     >  2:354032/1‑150 (MQ=255)                                                                                                 gCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGctct                                                    <  1:721075/150‑1 (MQ=255)                                                                                                    tGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCGATGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGc                                                 >  1:1168045/1‑150 (MQ=255)                                                                                                     gCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGcc                                                >  1:1091456/1‑150 (MQ=255)                                                                                                        ccccAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCctgagccccgcgctccacctcgccccgggcccatgcca                                                                                                                <  2:649518‑M1/83‑39 (MQ=255)                                                                                                        ccccAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCctgagccccgcgctccacctcgccccgggcccatgcca                                                                                                                >  1:649518‑M1/1‑45 (MQ=255)                                                                                                         cccAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTgaa                                                                                >  2:349239/1‑114 (MQ=255)                                                                                                         cccAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTgaa                                                                                <  1:349239/114‑1 (MQ=255)                                                                                                            aGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCctgagccccgcgctccacctcgccccgggccca                                                                                                                     >  1:1201772‑M1/1‑41 (MQ=255)                                                                                                            aGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCctgagccccgcgctccacctcgccccgggccca                                                                                                                     <  2:1201772‑M1/74‑34 (MQ=255)                                                                                                            aGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGAt                                         <  2:1091456/150‑1 (MQ=255)                                                                                                             gTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGAATCTGCTCTGGCCATTCGAtg                                        >  2:821861/1‑150 (MQ=255)                                                                                                                cATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGACACAGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGc                                     <  1:665611/150‑1 (MQ=255)                                                                                                                    gCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCAtt                                 >  1:326571/1‑150 (MQ=255)                                                                                                                    gCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCGGGTGCTGCTGTGGCCATTCGATGTGCCAtt                                 >  2:968728/1‑150 (MQ=255)                                                                                                                     cTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCATTCAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTg                                <  1:821861/150‑1 (MQ=255)                                                                                                                      tGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGa                                          >  2:1188322/1‑139 (MQ=255)                                                                                                                      tGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGa                                          <  1:1188322/139‑1 (MQ=255)                                                                                                                          cTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGtgat                           <  2:583313/150‑1 (MQ=255)                                                                                                                                     tGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCa                <  1:354032/150‑1 (MQ=255)                                                                                                                                       cTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCTGGGGTCCAACCATGAGATTGAGGCAATGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTCGCCATTCGATGCGCCATTGGTGATTATATGTGCCATg              <  2:1168045/150‑1 (MQ=255)                                                                                                                                            ggTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTAGACGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTc         <  1:989660/150‑1 (MQ=255)                                                                                                                                                 tGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGgccagcacctccagcaacgtcgcgaagcccagcgatgcactgggg                                                                       <  2:649518‑M2/83‑46 (MQ=255)                                                                                                                                                 tGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGgccagcacctccagcaacgtcgcgaagcccagcgatgcactgggg                                                                       >  1:649518‑M2/1‑38 (MQ=255)                                                                                                                                                   gCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGt  <  2:805444/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     TCGGGGATGGTGTGACGCCAAGCCTGGATTGTGAGCGGCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTGGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGT  >  NC_002947/1334908‑1335203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.