New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1335055	47 (1.040)	4 (0.090)	4/242	NT	9.0%	coding (224/990 nt)	PP_1160	asparaginase family protein
	?	NC_002947	= 1335089	35 (0.790)					coding (258/990 nt)	PP_1160	asparaginase family protein

GCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGTCAGCCGGGCAATGATGGGCCGGCCAACTTGTT  >  NC_002947/1334945‑1335235                                                                                                                                                 |                                                                                                                                                    gCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCtt                                                                                                                                                <  1:388639/150‑1 (MQ=255)  cAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑g                                                                                                                                              <  1:170073/150‑1 (MQ=255)  cAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑g                                                                                                                                              <  2:1057924/150‑1 (MQ=255)         ttCAGGTTCCACAATTGCGCGAAATGGCGCAGTTTAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGa                                                                                                                                       <  1:208381/150‑1 (MQ=255)           cAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATAGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGc                                                                                                                                     <  1:75229/150‑1 (MQ=255)              gTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCaa                                                                                                                                  >  1:583313/1‑150 (MQ=255)                 ccACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAggg                                                                                                                               >  1:525702/1‑150 (MQ=255)                            cgAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGGGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCt                                                                                                                    >  2:1114011/1‑150 (MQ=255)                             gAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCtt                                                                                                                   >  2:602673/1‑150 (MQ=255)                              aaaTGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTg                                                                                                                  <  2:525702/150‑1 (MQ=255)                                aTGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTgaa                                                                                                                <  2:222555/150‑1 (MQ=255)                                  ggCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑g                                                                                                                                              <  2:921567/118‑1 (MQ=255)                                  ggCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑g                                                                                                                                              >  1:921567/1‑118 (MQ=255)                                         ttGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGcc                                                                                                       <  1:658526/150‑1 (MQ=255)                                                    ttCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGa                                                                                            >  2:721075/1‑150 (MQ=255)                                                       aTTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGcc                                                                                                                                    >  1:809610/1‑107 (MQ=255)                                                       aTTGTCCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGcc                                                                                                                                    <  2:809610/107‑1 (MQ=255)                                                           tgCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGctc                                                                                     >  2:354032/1‑150 (MQ=255)                                                            gCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGctct                                                                                    <  1:721075/150‑1 (MQ=255)                                                               tGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCGATGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGc                                                                                 >  1:1168045/1‑150 (MQ=255)                                                                gCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGcc                                                                                >  1:1091456/1‑150 (MQ=255)                                                                    cccAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTgaa                                                                                                                <  1:349239/114‑1 (MQ=255)                                                                    cccAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTgaa                                                                                                                >  2:349239/1‑114 (MQ=255)                                                                       aGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGAt                                                                         <  2:1091456/150‑1 (MQ=255)                                                                        gTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGAATCTGCTCTGGCCATTCGAtg                                                                        >  2:821861/1‑150 (MQ=255)                                                                           cATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGACACAGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGc                                                                     <  1:665611/150‑1 (MQ=255)                                                                               gCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCAtt                                                                 >  1:326571/1‑150 (MQ=255)                                                                               gCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCGGGTGCTGCTGTGGCCATTCGATGTGCCAtt                                                                 >  2:968728/1‑150 (MQ=255)                                                                                cTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCATTCAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTg                                                                <  1:821861/150‑1 (MQ=255)                                                                                 tGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGa                                                                          >  2:1188322/1‑139 (MQ=255)                                                                                 tGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGa                                                                          <  1:1188322/139‑1 (MQ=255)                                                                                     cTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGtgat                                                           <  2:583313/150‑1 (MQ=255)                                                                                                tGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCa                                                <  1:354032/150‑1 (MQ=255)                                                                                                  cTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCTGGGGTCCAACCAT‑GAGATTGAGGCAATGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTCGCCATTCGATGCGCCATTGGTGATTATATGTGCCATg                                              <  2:1168045/150‑1 (MQ=255)                                                                                                       ggTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTAGACGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTc                                         <  1:989660/150‑1 (MQ=255)                                                                                                            tGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGgccagcacctccagcaacgtcgcgaagcccagcgatgcactgggg                                                                                                        >  1:649518‑M2/1‑38 (MQ=255)                                                                                                            tGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGgccagcacctccagcaacgtcgcgaagcccagcgatgcactgggg                                                                                                        <  2:649518‑M2/83‑46 (MQ=255)                                                                                                              gCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGt                                  <  2:805444/150‑1 (MQ=255)                                                                                                                 tGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGgccagcacctccagcaacgtcgcgaagcccagcgatgcact                                                                                                            <  2:1201772‑M2/74‑42 (MQ=255)                                                                                                                 tGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGgccagcacctccagcaacgtcgcgaagcccagcgatgcact                                                                                                            >  1:1201772‑M2/1‑33 (MQ=255)                                                                                                                    gCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTTAGGCATT‑AGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGTCAGCCg                            <  1:968728/150‑1 (MQ=255)                                                                                                                      ccGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGTCAGCCggg                          >  2:430970/1‑150 (MQ=255)                                                                                                                                gTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGCGCCAATGTACCTACAGCCTTGAAGAACCCCACTGCCCGCAACAGCGGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGTCAGCCGGGCAATGATggg                <  1:1114011/150‑1 (MQ=255)                                                                                                                                       gcgGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGTCAGCCGGGCAATGATGGGCCGGCCa         >  2:226902/1‑150 (MQ=255)                                                                                                                                              tCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGTCAGCCGGGCAATGATGGGCCGGCCAACttgtt  <  1:430970/150‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                    GCAACTGCTTCAGGTTCCACAATTGCGCGAAATGGCGCAGTTGAACGTTGCTTCATTGTGCCTGCTCCCCAGTGCATCGCTGGGCTTCGCGACGTTGCTGGAGGTGCTGGCATGGGCCCGGGGCGAGGTGGAGCGCGGGGCTCAGGCCTT‑GGTATTGAGCCAAGGGACCGACAGCCTTGAAGAAACGGCCTATTTCCTGGATCTGCTCTGGCCATTCGATGTGCCATTGGTGATGACCGGTGCCATGCGCTCGGCGAGTCAGCCGGGCAATGATGGGCCGGCCAACTTGTT  >  NC_002947/1334945‑1335235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.