New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1558189 =	38 (0.840)	4 (0.090)	4/238	NT	9.4%	coding (26/993 nt)	PP_1368	glycosyltransferase domain‑containing protein
	?	NC_002947	1558211 =	41 (0.950)					coding (4/993 nt) coding (732/732 nt)	PP_1368 PP_1369	glycosyltransferase domain‑containing protein hypothetical protein

ACAGGCGCAGGCGCAGCGCATTGATGACCCAGCACAACAGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAGTCACGGGATGAGCGATGGCGCATGTCTACAGG  >  NC_002947/1558040‑1558333                                                                                                                                                      |                                                                                                                                                  cgagcacgttgcgcttgggactgcaccctgtagacatgcgccatcgctcatcccgtgactattggttgcgcacgctggagagactgttgaaggatggccgcgaaccgctgaccaagtctgcctggctggagcgccagggggcagcatgaa                                                                                                                                                   >  1:927872‑M1/150‑150 (MQ=255)   aggcgcaggcgcAGCGCATTGATGACCCAGCACAACAGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGTAGTAGCCCGCTACCGCCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATgccagc                                                                                                                                                 <  1:1053847/150‑1 (MQ=255)           gcgcagcgcaTTGATGACGCAGCACAACAGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGAAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCgccagcca                                                                                                                                         >  2:72861/1‑150 (MQ=255)           gcgcagcgcaTTGATGACCCAGCACAACAGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCgccagcca                                                                                                                                         <  1:499940/150‑1 (MQ=255)                 cgcaTTGATGACCCAGCACAACAGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCa                                                                                                                                   <  2:1016357/150‑1 (MQ=255)                            cccAGCACAACAGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCAtgc                                                                                                                        >  1:969174/1‑150 (MQ=255)                             ccAGCACAACAGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCAtgct                                                                                                                       >  1:873069/1‑150 (MQ=255)                                  acaacaGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGcccc                                                                                                                  <  1:1138093/150‑1 (MQ=255)                                   caacgGAATCATGCATAGTGGCATGCGCAGCCCGTCGCAGTCGACTAGGGGCAGCCTCTGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGccccc                                                                                                                 <  2:11449/150‑1 (MQ=255)                                    aacaGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCCCCAGCTGGTCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCt                                                                                                                >  1:991174/1‑150 (MQ=255)                                                 cTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCACTccag‑cca                                                                                                  <  2:834033/150‑1 (MQ=255)                                                     tagCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCa                                                                                              <  2:969174/150‑1 (MQ=255)                                                         aTGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAGACCAGGcctgg                                                                                           >  2:1143109/1‑146 (MQ=255)                                                          tGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATgccagc                                                                                                                                                 <  2:952741/95‑1 (MQ=255)                                                          tGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATgccagc                                                                                                                                                 >  1:952741/1‑95 (MQ=255)                                                           gAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTg                                                                                        <  1:1136032/150‑1 (MQ=255)                                                           gAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTg                                                                                        <  1:72861/150‑1 (MQ=255)                                                           gAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTg                                                                                        <  2:873069/150‑1 (MQ=255)                                                           gAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTg                                                                                        <  2:425230/150‑1 (MQ=255)                                                                           tCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGc                                                                        <  1:1016171/150‑1 (MQ=255)                                                                              aaCCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CAAGGCAGACTTGTTCAGCGGTTCGCGGCCAt                                                                     >  1:20756/1‑150 (MQ=255)                                                                                gagactgttgaaggatggccgcgaaccgctgaccaagtctgcctggctggagcgccagggggcagcatgaAGCGCCAGCCAGGCCCAGCGCTTCAtg                                                                                                                         <  2:405088‑M1/27‑1 (MQ=255)                                                                                gagactgttgaaggatggccgcgaaccgctgaccaagtctgcctggctggagcgccagggggcagcatgaAGCGCCAGCCAGGCCCAGCGCTTCAtg                                                                                                                         >  1:405088‑M1/71‑97 (MQ=255)                                                                                  ggCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCtt                                                                 <  1:1164429/150‑1 (MQ=255)                                                                                     tCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCa                                                                                                                                   <  2:1152830/82‑1 (MQ=255)                                                                                     tCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCa                                                                                                                                   >  1:1152830/1‑82 (MQ=255)                                                                                     tCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCAAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCaa                                                              <  1:75581/150‑1 (MQ=255)                                                                                      cAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAAc                                                             >  2:608195/1‑150 (MQ=255)                                                                                           tCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTc                                                                             >  2:1011786/1‑129 (MQ=255)                                                                                           tCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTc                                                                             <  1:1011786/129‑1 (MQ=255)                                                                                            ggatggccgcgaaccgctgaccaagtctgcctggctggagcgccagggggcagcatgaAGCGCCAGCCAGGCCCAGCGCTTCAtgc                                                                                                                        >  2:1011082‑M1/59‑86 (MQ=255)                                                                                            ggatggccgcgaaccgctgaccaagtctgcctggctggagcgccagggggcagcatgaAGCGCCAGCCAGGCCCAGCGCTTCAtgc                                                                                                                        <  1:1011082‑M1/28‑1 (MQ=255)                                                                                            cGGCAGCAGCTCGCTGCCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGtctc                                                       >  1:777404/1‑150 (MQ=255)                                                                                                     cTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCa                                                                                    <  1:405678/112‑1 (MQ=255)                                                                                                     cTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCa                                                                                    >  2:405678/1‑112 (MQ=255)                                                                                                           accgccCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAAc                                        <  1:68762/150‑1 (MQ=255)                                                                                                                ccAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGtctctc                                                     <  1:151389/132‑1 (MQ=255)                                                                                                                ccAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGtctctc                                                     >  2:151389/1‑132 (MQ=255)                                                                                                                ccAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATa                                   >  1:903190/1‑150 (MQ=255)                                                                                                                 cAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAg                                  >  2:487473/1‑150 (MQ=255)                                                                                                                  tgcagcGCTGGGGCCAGCGTTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAGt                                 >  2:1142167/6‑150 (MQ=255)                                                                                                                      aCGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAGTCAcc                             <  2:903190/150‑2 (MQ=255)                                                                                                                              aCCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAGTCACGGGATGAGc                     >  2:45564/1‑150 (MQ=255)                                                                                                                                         aCCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAGTCACGGGATGAGCGATGGCGCATg          >  1:1162646/1‑150 (MQ=255)                                                                                                                                          cccAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCACCTGGCGCTCCAC‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAGTCACGGGATGAGCGATGGCGCATGt         >  2:503870/1‑150 (MQ=255)                                                                                                                                            cAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAGTCACGGGATGAGCGATGGCGCATGTCt       >  2:1083478/1‑150 (MQ=255)                                                                                                                                                 aTGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAGTCACGGGATGAGCGATGGCGCATGTCTACAgg  <  1:45564/150‑1 (MQ=255)                                                                                                                                                     cagcgccagcCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAg                                                           <  2:658997/89‑1 (MQ=255)                                                                                                                                                     cagcgccagcCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAg                                                           >  1:658997/1‑89 (MQ=255)                                                                                                                                                      |                                                                                                                                                  ACAGGCGCAGGCGCAGCGCATTGATGACCCAGCACAACAGAATCATGCCTAGTAGCATGAGCAGCAGGTGCGGGTCGAACCGGCTCAGCCTCGGCAGCAGCTCGCTACCACCCAGCAACGCTGGCACCAGCGCTGCACCCAGCAATGCCAGCGCCAGCCAGGCCCAGCGCTTCATGCTGCCCCCTGGCGCTCCAG‑CCAGGCAGACTTGGTCAGCGGTTCGCGGCCATCCTTCAACAGTCTCTCCAGCGTGCGCAACCAATAGTCACGGGATGAGCGATGGCGCATGTCTACAGG  >  NC_002947/1558040‑1558333

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.