| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2314066 | 41 (0.910) | 3 (0.070) | 3/240 | NT | 7.3% | coding (65/1215 nt) | benE‑I | benzoate transport protein |
| ? | NC_002947 | = 2314102 | 37 (0.850) | coding (29/1215 nt) | benE‑I | benzoate transport protein | |||||
ACAATGCCAGGCCGCTGAGGCCGACGCCGATCGACACCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGC > NC_002947/2313917‑2314213 | aCAATGCCAGGCCGCTGAGGCCGACGCCGATCGACACCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAA < 1:504178‑M1/150‑1 (MQ=255) cAATGCCAGGCCGCTGAGGCCGACGCCGATCGACACCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAAt < 2:238282/150‑1 (MQ=255) cAGGCCGCTGAGGCCGACTCCGATCGACACCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCgg < 2:209912/150‑1 (MQ=255) gCCGACGCCGATCGACACCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGAtgtc > 2:945836/1‑150 (MQ=255) ccGACGCCGATCGACACCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGAtgtct < 2:310283/150‑1 (MQ=255) cGACGCCGATCGACACCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGAtgtctg > 1:779213/1‑150 (MQ=255) cacCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCgg < 1:627502/150‑1 (MQ=255) acCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCggg > 1:563270/1‑150 (MQ=255) ccGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCgggg < 2:212034/150‑1 (MQ=255) cccAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGttg < 1:387192‑M2/150‑4 (MQ=255) aGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGa > 1:885108/1‑138 (MQ=255) aGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGa < 2:885108/138‑1 (MQ=255) aGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCag > 2:361831/1‑150 (MQ=255) cACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAAccccgctcaggctgacagacatccttcacccggtgattgccggactc < 2:530148‑M1/150‑48 (MQ=255) cACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCtt > 1:732418/1‑150 (MQ=255) aCGATTACGTCAGCTCCGGGCTCAGCCCGGCCATTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGAATTTTTGCCTGAGCGGGGTTGCAGAGCttt < 1:31190/150‑1 (MQ=255) aCGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCttt > 2:1088582/1‑150 (MQ=255) aCGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAAccccgctcaggctgacagacatccttcacccggtgat > 2:1052064‑M1/1‑96 (MQ=255) aCGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAAccccgctcaggctgacagacatccttcacccggtgat < 1:1052064‑M1/133‑38 (MQ=255) cAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGgcgc < 2:383026/150‑1 (MQ=255) ggCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATgg > 2:735334/1‑150 (MQ=255) cTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGtt > 1:86878/1‑150 (MQ=255) cTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGtt > 2:162532/1‑150 (MQ=255) cAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGc < 2:387192/150‑1 (MQ=255) aGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGcc > 1:1011461/1‑150 (MQ=255) cgtcaaCTTTGGGCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATAACCGAAACGAGTCCGGCAATCATCGGGTGAAGGATGTTTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGTGGCCTCCATGGTCGCCTCTg < 2:299030/145‑1 (MQ=255) cgccTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGAt < 2:779213/150‑1 (MQ=255) cTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATgag < 2:1011461/150‑1 (MQ=255) cTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATgag < 1:945836/150‑1 (MQ=255) cTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATgag > 2:580422/1‑150 (MQ=255) ccAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGtt < 1:1020238/150‑1 (MQ=255) aCGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGAt > 1:813497/1‑58 (MQ=255) aCGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGAt < 2:813497/58‑1 (MQ=255) gccgccGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAg < 1:162532/150‑1 (MQ=255) gccgTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAgggg < 2:86878/150‑1 (MQ=255) aGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATc < 1:580422/150‑1 (MQ=255) ttGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTATCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCCGTTTTGTGCGGCGAAGGGGTAATCCg > 2:594802/1‑150 (MQ=255) gATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAg < 1:711868/135‑1 (MQ=255) gATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAg > 2:711868/1‑135 (MQ=255) tCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGa > 2:330042/1‑71 (MQ=255) tCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGa < 1:330042/71‑1 (MQ=255) cGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCctc > 1:84516/1‑90 (MQ=255) cGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCctc < 2:84516/90‑1 (MQ=255) gAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGttgccggactcgtttcggtgatcgtcaactacggcggcacgttcatcctggtgttccaggcggccaaagtggccgggctgagcccggagctgacgtcatcgtg < 2:530148‑M2/150‑104 (MQ=255) gAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGc < 1:735334/150‑1 (MQ=255) aGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGcc < 2:732418/150‑1 (MQ=255) cGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAggg > 2:840805/1‑120 (MQ=255) cGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAggg < 1:840805/120‑1 (MQ=255) cAAccccgctcaggctgacagacatccttcacccggtgattgccggactcgtttcggtgatcgtcaactacggcggcacgttcatcctggtgttccaggcggccaaagtggccgggctgagcccggagctgacgtcatcgtgggtctggg < 1:387192‑M1/150‑148 (MQ=255) aTCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGttgccggactcgtttcggtgatcgtcaactacggcggcacgttcatcctggtgttccaggcggccaaagtggccgggctgagcccggagctgacgt > 2:1052064‑M2/1‑37 (MQ=255) aTCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGttgccggactcgtttcggtgatcgtcaactacggcggcacgttcatcctggtgttccaggcggccaaagtggccgggctgagcccggagctgacgt < 1:1052064‑M2/133‑97 (MQ=255) | ACAATGCCAGGCCGCTGAGGCCGACGCCGATCGACACCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGC > NC_002947/2313917‑2314213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |