New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2314066	41 (0.910)	3 (0.070)	3/240	NT	7.3%	coding (65/1215 nt)	benE‑I	benzoate transport protein
	?	NC_002947	= 2314102	37 (0.850)					coding (29/1215 nt)	benE‑I	benzoate transport protein

CCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGCAGCCCAAGGCTGTTCCTGAAGAAAAAGGCTGCCCGACA  >  NC_002947/2313953‑2314251                                                                                                                                                      |                                                                                                                                                      ccGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCgggg                                                                                                                                                       <  2:212034/150‑1 (MQ=255)    cccAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGttg                                                                                                                                                    <  1:387192‑M2/150‑4 (MQ=255)       aGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCag                                                                                                                                                 >  2:361831/1‑150 (MQ=255)            cACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCtt                                                                                                                                            >  1:732418/1‑150 (MQ=255)             aCGATTACGTCAGCTCCGGGCTCAGCCCGGCCATTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGAATTTTTGCCTGAGCGGGGTTGCAGAGCttt                                                                                                                                           <  1:31190/150‑1 (MQ=255)             aCGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCttt                                                                                                                                           >  2:1088582/1‑150 (MQ=255)                       cAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGgcgc                                                                                                                                 <  2:383026/150‑1 (MQ=255)                               ggCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATgg                                                                                                                         >  2:735334/1‑150 (MQ=255)                                 cTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGtt                                                                                                                       >  2:162532/1‑150 (MQ=255)                                 cTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGtt                                                                                                                       >  1:86878/1‑150 (MQ=255)                                   cAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGc                                                                                                                     <  2:387192/150‑1 (MQ=255)                                    aGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGcc                                                                                                                    >  1:1011461/1‑150 (MQ=255)                                        cgtcaaCTTTGGGCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATAACCGAAACGAGTCCGGCAATCATCGGGTGAAGGATGTTTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGTGGCCTCCATGGTCGCCTCTg                                                                                                                <  2:299030/145‑1 (MQ=255)                                                     cgccTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGAt                                                                                                   <  2:779213/150‑1 (MQ=255)                                                        cTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATgag                                                                                                >  2:580422/1‑150 (MQ=255)                                                        cTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATgag                                                                                                <  2:1011461/150‑1 (MQ=255)                                                        cTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATgag                                                                                                <  1:945836/150‑1 (MQ=255)                                                                ccAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGtt                                                                                        <  1:1020238/150‑1 (MQ=255)                                                                             gccgccGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAg                                                                           <  1:162532/150‑1 (MQ=255)                                                                                gccgTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAgggg                                                                        <  2:86878/150‑1 (MQ=255)                                                                                     aGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATc                                                                   <  1:580422/150‑1 (MQ=255)                                                                                       ttGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTATCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCCGTTTTGTGCGGCGAAGGGGTAATCCg                                                                 >  2:594802/1‑150 (MQ=255)                                                                                            gATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAg                                                                           >  2:711868/1‑135 (MQ=255)                                                                                            gATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAg                                                                           <  1:711868/135‑1 (MQ=255)                                                                                              tCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGa                                                                                                                                         <  1:330042/71‑1 (MQ=255)                                                                                              tCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGa                                                                                                                                         >  2:330042/1‑71 (MQ=255)                                                                                                  cGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCctc                                                                                                                  >  1:84516/1‑90 (MQ=255)                                                                                                  cGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCctc                                                                                                                  <  2:84516/90‑1 (MQ=255)                                                                                                        gAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGttgccggactcgtttcggtgatcgtcaactacggcggcacgttcatcctggtgttccaggcggccaaagtggccgggctgagcccggagctgacgtcatcgtg                                                <  2:530148‑M2/150‑104 (MQ=255)                                                                                                        gAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGc                                                <  1:735334/150‑1 (MQ=255)                                                                                                         aGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGcc                                               <  2:732418/150‑1 (MQ=255)                                                                                                             cGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAggg                                                                         <  1:840805/120‑1 (MQ=255)                                                                                                             cGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAggg                                                                         >  2:840805/1‑120 (MQ=255)                                                                                                                  aTCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGttgccggactcgtttcggtgatcgtcaactacggcggcacgttcatcctggtgttccaggcggccaaagtggccgggctgagcccggagctgacgt                                                       >  2:1052064‑M2/1‑37 (MQ=255)                                                                                                                  aTCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGttgccggactcgtttcggtgatcgtcaactacggcggcacgttcatcctggtgttccaggcggccaaagtggccgggctgagcccggagctgacgt                                                       <  1:1052064‑M2/133‑97 (MQ=255)                                                                                                                     aCCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGCAGccc                                   >  1:999663/1‑150 (MQ=255)                                                                                                                     aCCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGCAGccc                                   >  1:392154/1‑150 (MQ=255)                                                                                                                               ggATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTTTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCTGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGCAGCCCAAGGCTGTTc                         >  1:198832/1‑150 (MQ=255)                                                                                                                                   gtctgtcAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACt                                                              <  1:973295/109‑1 (MQ=255)                                                                                                                                   gtctgtcAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACt                                                              >  2:973295/1‑109 (MQ=255)                                                                                                                                   gtctgtcAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGCAGCCCAAGGCTGTTCCTga                     >  2:907127/1‑150 (MQ=255)                                                                                                                                           gCCTGAGCGGGGTTTCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGATGAGCAGTTTTGTGCGGCGAAGGGGTACTCCGACTGCAGCGTCATTGGCCCTTGCGTAGCCCAAGGCTGTTCCTGAAGAAAAAg             >  2:1203303/1‑150 (MQ=255)                                                                                                                                              tGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGCAGCCCAAGGCTGTTCCTGAAGAAAAAGGCt          >  1:560297/1‑150 (MQ=255)                                                                                                                                                    gggTTGCAGAGCGTTGAGCAGGCGCGTCGATGGTTGCCTCTGGTAATGGTCAGATGAGGAGGAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGCAGCCCAAGGCTGTTCCTGAAGAAAAAGGCTGCCcga    <  2:563270/150‑1 (MQ=255)                                                                                                                                                      gTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGCAGCCCAAGGCTGTTCCTGAAGAAAAAGGCTGCCcgaca  >  1:513576/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                      CCGCCCAGACCCACGATGACGTCAGCTCCGGGCTCAGCCCGGCCACTTTGGCCGCCTGGAACACCAGGATGAACGTGCCGCCGTAGTTGACGATCACCGAAACGAGTCCGGCAATCACCGGGTGAAGGATGTCTGTCAGCCTGAGCGGGGTTGCAGAGCTTTGAGCAGGCGCGTCCATGGTTGCCTCTGGTAATGGTCAGATGAGGAGCAGTTTTGTGCGGCGAAGGGGTAATCCGACTGCAGCGTCATTGGCCCTTTCGCAGCCCAAGGCTGTTCCTGAAGAAAAAGGCTGCCCGACA  >  NC_002947/2313953‑2314251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.